RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 AGAP2Q99490 1192 aa13.58□□□□□ -0.23
CLCN6-201ENST00000312413 CHRAC1Q9NRG0 131 aa13.58□□□□□ -0.23
CLCN6-201ENST00000312413 ADARB2Q9NS39 739 aaKnown RBP13.58□□□□□ -0.23
CLCN6-201ENST00000312413 PTPRMP28827 1452 aa13.58□□□□□ -0.23
CLCN6-201ENST00000312413 RSL1D1O76021 490 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 SPATA31C1P0DKV0 1188 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 HDCP19113 662 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 ITPKAP23677 461 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 CLCQ05315 142 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 PLD5Q8N7P1 536 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 SNX33Q8WV41 574 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 SLC38A4Q969I6 547 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 MKL1Q969V6 931 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 GATA5Q9BWX5 397 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 ANKRA2Q9H9E1 313 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 C5orf60A6NFR6 353 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 MID1O15344 667 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 STK16O75716 305 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 KRT33AO76009 404 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 DNTTP04053 509 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 CDKN2BP42772 138 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 OR2B6P58173 313 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 ACAP2Q15057 778 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 CELF3Q5SZQ8 465 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 CSGALNACT1Q8TDX6 532 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 P2RX7Q99572 595 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 MRPL17Q9NRX2 175 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 DNAJB4Q9UDY4 337 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 PCDHGB3Q9Y5G1 929 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 HCN1O60741 890 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 SLC25A14O95258 325 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 PAX3P23760 479 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 ADRA1BP35368 520 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 CCNFP41002 786 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 ADCYAP1R1P41586 468 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 PTP4A2Q12974 167 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 PDCD4Q53EL6 469 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 IQSEC1Q6DN90 963 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 UBE2J2Q8N2K1 259 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 IPPKQ9H8X2 491 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 KCTD5Q9NXV2 234 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 MGAT4AQ9UM21 535 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 CEP152O94986 1710 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 WRBO00258 174 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 C17orf64Q86WR6 236 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 CRYBG2Q8N1P7 616 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 LRRC57Q8N9N7 239 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 FAM156AQ8NDB6 213 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 RNF31Q96EP0 1072 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 AGO3Q9H9G7 860 aaKnown RBP13.58□□□□□ -0.24
CLCN6-201ENST00000312413 UPB1Q9UBR1 384 aa13.58□□□□□ -0.24
CLCN6-201ENST00000312413 NRCAMQ92823 1304 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 EFCAB9A8MZ26 197 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 C1QTNF3-AMACRE9PGA6 284 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 CLDN9O95484 217 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 GJD3Q8N144 294 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 GPER1Q99527 375 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 ACAT2Q9BWD1 397 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 TMEM27Q9HBJ8 222 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 GRHL1Q9NZI5 618 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 HMGXB4Q9UGU5 601 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 TRAV19A0A0A6YYK7 116 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 A0A0G2JPF8 293 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 RIIAD1A6NNX1 92 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 HNRNPCL3B7ZW38 293 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 RBMXL2O75526 392 aaKnown RBP13.57□□□□□ -0.24
CLCN6-201ENST00000312413 HNRNPCL4P0DMR1 293 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 PTPRAP18433 802 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 PTX3P26022 381 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-201ENST00000312413 GBE1Q04446 702 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 PAOXQ6QHF9 649 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 JAZF1Q86VZ6 243 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 TSEN15Q8WW01 171 aaKnown RBP13.57□□□□□ -0.24
CLCN6-201ENST00000312413 CLCC1Q96S66 551 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 FAM129BQ96TA1 746 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 CD320Q9NPF0 282 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 NUDT4Q9NZJ9 180 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 GPSM3Q9Y4H4 160 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 CCNB2O95067 398 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 AP2A1O95782 977 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 LAMP2P13473 410 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 NCK1P16333 377 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 IST1P53990 364 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 CDH12P55289 794 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 PHC1P78364 1004 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 MPPE1Q53F39 396 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 OR4K2Q8NGD2 314 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 TIFAQ96CG3 184 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 TOR3AQ9H497 397 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 AASSQ9UDR5 926 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 BAZ2BQ9UIF8 2168 aaKnown RBP13.57□□□□□ -0.24
CLCN6-201ENST00000312413 SCAMP3O14828 347 aaKnown RBP13.57□□□□□ -0.24
CLCN6-201ENST00000312413 LRCH4O75427 683 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 PAGE1O75459 146 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 ASLP04424 464 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 ITIH1P19827 911 aa13.57□□□□□ -0.24
CLCN6-201ENST00000312413 CXCL9Q07325 125 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms