RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 KIF2BQ8N4N8 673 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 Q8N9G6 341 aaPredicted RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 DRAXINQ8NBI3 349 aaPredicted RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 PLA2G15Q8NCC3 412 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 PPHLN1Q8NEY8 458 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 OR2A12Q8NGT7 310 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 DCUN1D1Q96GG9 259 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 TOE1Q96GM8 510 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 HSPA12BQ96MM6 686 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 IL17FQ96PD4 163 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 HGH1Q9BTY7 390 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 TRIM62Q9BVG3 475 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 YIPF2Q9BWQ6 316 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 PHF7Q9BWX1 381 aaPredicted RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 SLC2A11Q9BYW1 496 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 INTS9Q9NV88 658 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 SCHIP1Q9P0W5 487 aaPredicted RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 GALPQ9UBC7 116 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 DRG1Q9Y295 367 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 MTO1Q9Y2Z2 717 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 SYNDIG1LA6NDD5 238 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 NDC80O14777 642 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 DIAPH2O60879 1101 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 GOT2P00505 430 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 C9P02748 559 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 CTSLP07711 333 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 GFAPP14136 432 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 STX2P32856 288 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 PTGER1P34995 402 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 MAGEA12P43365 314 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 INHBCP55103 352 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 YBX1P67809 324 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 CYP4F2P78329 520 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 MEF2AQ02078 507 aaPredicted RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 CAV1Q03135 178 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 PLCL1Q15111 1095 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 PRRT3Q5FWE3 981 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 NAPEPLDQ6IQ20 393 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 SUSD1Q6UWL2 747 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 SZRD1Q7Z422 152 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 TBC1D1Q86TI0 1168 aaPredicted RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 PTCD2Q8WV60 388 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 KCTD4Q8WVF5 259 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 CENPIQ92674 756 aaPredicted RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 ISL2Q96A47 359 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 MRGPRX2Q96LB1 330 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 HEPHQ9BQS7 1158 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 EPHX3Q9H6B9 360 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 ALG9Q9H6U8 611 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 STX18Q9P2W9 335 aaKnown RBP4.9□□□□□ -1.62
CAST-201ENST00000309190 SIT1Q9Y3P8 196 aa4.9□□□□□ -1.62
CAST-201ENST00000309190 MEI4A8MW99 385 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 SIX3O95343 332 aaPredicted RBP4.9□□□□□ -1.63
CAST-201ENST00000309190 ITGAVP06756 1048 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 HNRNPA1P09651 372 aaKnown RBP eCLIP4.9□□□□□ -1.63
CAST-201ENST00000309190 ITPKAP23677 461 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 OPRD1P41143 372 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 UBE3AQ05086 875 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 SMARCB1Q12824 385 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 CDH17Q12864 832 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 DMC1Q14565 340 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 E2F5Q15329 346 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 CARD16Q5EG05 197 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 BNIPLQ7Z465 357 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 HSD11B1LQ7Z5J1 315 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 LRRC6Q86X45 466 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.9□□□□□ -1.63
CAST-201ENST00000309190 CPNE9Q8IYJ1 553 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 IL17RCQ8NAC3 791 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 SIDT2Q8NBJ9 832 aaKnown RBP4.9□□□□□ -1.63
CAST-201ENST00000309190 MDGA1Q8NFP4 955 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 SP7Q8TDD2 431 aaPredicted RBP4.9□□□□□ -1.63
CAST-201ENST00000309190 PLD4Q96BZ4 506 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 SERAC1Q96JX3 654 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 TRAPPC9Q96Q05 1148 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 CDK15Q96Q40 435 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 NUDCD1Q96RS6 583 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 LGR4Q9BXB1 951 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 FOXP3Q9BZS1 431 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 ABCA4P78363 2273 aa4.9□□□□□ -1.63
CAST-201ENST00000309190 A0A0G2JND7 137 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 A0A1B0GVG6 124 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PABPN1LA6NDY0 278 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 TK2O00142 265 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GSC2O15499 205 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 FGF10O15520 208 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 MAGEC1O60732 1142 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PRAMEF11O60813 436 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CRCPO75575 148 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ANXA9O76027 345 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 KIAA0754O94854 1291 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CCDC166P0CW27 439 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 HOXB8P17481 243 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 FOXK1P85037 733 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CREMQ03060 361 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 MTAPQ13126 283 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 MPP3Q13368 585 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ZNF77Q15935 545 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SLC9A4Q6AI14 798 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms