RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 SCOCQ9UIL1 159 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KIAA1257Q9ULG3 409 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ASB3Q9Y575 518 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TEX264Q9Y6I9 313 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 IKBKGQ9Y6K9 419 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PTPRJQ12913 1337 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CKAP5Q14008 2032 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CAPN14A8MX76 684 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 TAF4O00268 1085 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 FCHO1O14526 889 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 COPEO14579 308 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 KRT38O76015 456 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 RNF8O76064 485 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CBX6O95503 412 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 TRUB2O95900 331 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 IFNB1P01574 187 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 TNNC2P02585 160 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SNRPB2P08579 225 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ZSCAN5DPP0CG00 497 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 RBP3P10745 1247 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 HAPLN1P10915 354 aaPredicted RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PIM1P11309 404 aaPredicted RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ETS1P14921 441 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CYP3A5P20815 502 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 TGM2P21980 687 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PSMA2P25787 234 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SSTR1P30872 391 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ATICP31939 592 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 GJC1P36383 396 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ACOT2P49753 483 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 NOVA1P51513 510 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SNX16P57768 344 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 EIF3EP60228 445 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 IRX4P78413 519 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ROR2Q01974 943 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 OGDHQ02218 1023 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CREB5Q02930 508 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 WASHC5Q12768 1159 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SF3A3Q12874 501 aaKnown RBP eCLIP4.92□□□□□ -1.623e-6■□□□□ 9.9
CKS1B-201ENST00000308987 NAB1Q13506 487 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 TRPC3Q13507 836 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 LLGL1Q15334 1064 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 STILQ15468 1287 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF77Q15935 545 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 KYAT1Q16773 422 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CR1LQ2VPA4 569 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 KHDC1Q4VXA5 237 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SLC39A12Q504Y0 691 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 BOLA3Q53S33 107 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 FNBP1LQ5T0N5 605 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SNX30Q5VWJ9 437 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ANKRD22Q5VYY1 191 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 WSCD1Q658N2 575 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PMS2CLQ68D20 193 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 GTF2IRD2BQ6EKJ0 949 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SPOPLQ6IQ16 392 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF449Q6P9G9 518 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 C1orf228Q6PIY5 440 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 DSTYKQ6XUX3 929 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 LRRC74BQ6ZQY2 392 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PRUNE1Q86TP1 453 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 GTF2IRD2Q86UP8 949 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 LRRC6Q86X45 466 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PASD1Q8IV76 773 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 MAP7D3Q8IWC1 876 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 UNC45BQ8IWX7 931 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 WDTC1Q8N5D0 677 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 OR5B17Q8NGF7 314 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 OR6P1Q8NGX9 317 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 RPLP0P6Q8NHW5 317 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PIP4K2CQ8TBX8 421 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF483Q8TF39 744 aaPredicted RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 STON2Q8WXE9 905 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 KLHL6Q8WZ60 621 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 DIO2Q92813 273 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 HAUS1Q96CS2 278 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ANKRD36BP1Q96IX9 119 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CYP2S1Q96SQ9 504 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 TBCBQ99426 244 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PKMYT1Q99640 499 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 SEPT5Q99719 369 aaPredicted RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CNPY3Q9BT09 278 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 EDEM2Q9BV94 578 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 TMEM120AQ9BXJ8 343 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 IQCGQ9H095 443 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 LINC00597Q9H2U6 94 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 VCX3BQ9H321 246 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 KIF9Q9HAQ2 790 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PLEKHA5Q9HAU0 1116 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 VPS45Q9NRW7 570 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ARL8BQ9NVJ2 186 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 IL1RAPL1Q9NZN1 696 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 HSFX1Q9UBD0 423 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 XPO7Q9UIA9 1087 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 CPSF3Q9UKF6 684 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 UBQLN1Q9UMX0 589 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ZFR2Q9UPR6 939 aaKnown RBP4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PLLPQ9Y342 182 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 PCDHGA5Q9Y5G8 931 aa4.92□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF462Q96JM2 2506 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms