RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 CSTF1Q05048 431 aaKnown RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 ITGA7Q13683 1181 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 OR4L1Q8NH43 312 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 ANKHQ9HCJ1 492 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 PCDHB1Q9Y5F3 818 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 DGKBQ9Y6T7 804 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 EFCAB9A8MZ26 197 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 TMEM161BQ8NDZ6 487 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 STARD7Q9NQZ5 370 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 RGS17Q9UGC6 210 aaPredicted RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 PPM1AP35813 382 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 RPL6Q02878 288 aaKnown RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 LLGL2Q6P1M3 1020 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 USP30Q70CQ3 517 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 DENND1CQ8IV53 801 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 PER2O15055 1255 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 RP2O75695 350 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 PRAMEF12O95522 483 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 PGAM4Q8N0Y7 254 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 RHBGQ9H310 441 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 DCLK1O15075 740 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 PDYNP01213 254 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 TPH1P17752 444 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 CRHR1P34998 444 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 AADACL4Q5VUY2 407 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SHQ1Q6PI26 577 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 PLEKHH3Q7Z736 793 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 CENPNQ96H22 339 aaPredicted RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 AARSD1Q9BTE6 412 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■■■■ 32.4
AFF1-201ENST00000307808 ACSS3Q9H6R3 686 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SGK2Q9HBY8 427 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 NUDT15Q9NV35 164 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 GAKO14976 1311 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 H3BRB1 525 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 MATN4O95460 622 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 LINC00032P0C843 101 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 HTR7P34969 479 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 MAMLD1Q13495 774 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 CERCAMQ5T4B2 595 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 IPCEF1Q8WWN9 437 aaPredicted RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 TUT1Q9H6E5 874 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 LYARQ9NX58 379 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 NKIRAS2Q9NYR9 191 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 GRIN2DO15399 1336 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 C22orf31O95567 290 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SLC25A3Q00325 362 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 GRIK4Q16099 956 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 GHDCQ8N2G8 530 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SOCS4Q8WXH5 440 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 LINGO1Q96FE5 620 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 ILVBLA1L0T0 632 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SCN2BO60939 215 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 COL6A2P12110 1019 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 CDC42EP5Q6NZY7 148 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 CREG2Q8IUH2 290 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SETD6Q8TBK2 473 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 NXNL1Q96CM4 212 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 RHOJQ9H4E5 214 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 CUEDC1Q9NWM3 386 aaPredicted RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 ZNF69Q9UC07 566 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 ZNF180Q9UJW8 692 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 SH3BGRLO75368 114 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 DBIP07108 87 aaKnown RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 PPP3CAQ08209 521 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 BORAQ6PGQ7 559 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 GLB1L3Q8NCI6 653 aaPredicted RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 LRTM1Q9HBL6 345 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SETD4Q9NVD3 440 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 KCNN3Q9UGI6 736 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 GPSM3Q9Y4H4 160 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 HEBP2Q9Y5Z4 205 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 PRAMEF1O95521 474 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SSR2P43308 183 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SAMD14Q8IZD0 417 aaPredicted RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 LRRC19Q9H756 370 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 SPATA7Q9P0W8 599 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 NFASCO94856 1347 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 LRATO95237 230 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 COLEC12Q5KU26 742 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 DNM1P34Q6PK57 102 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 MAFFQ9ULX9 164 aa13.05□□□□□ -0.32
AFF1-201ENST00000307808 POLR3HQ9Y535 204 aaPredicted RBP13.05□□□□□ -0.32
AFF1-201ENST00000307808 NACAE9PAV3 2078 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms