RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SMPDL3BQ92485 455 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC22A18Q96BI1 424 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 RAB11FIP5Q9BXF6 653 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 AP3M1Q9Y2T2 418 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 MYH15Q9Y2K3 1946 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 CNOT3O75175 753 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 UBXN7O94888 489 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 OR6B1O95007 311 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 CHRNB2P17787 502 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 MYL12AP19105 171 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 CLCNKAP51800 687 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 CDH13P55290 713 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 DNAJB14Q8TBM8 379 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 KIAA1143Q96AT1 154 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 CDCA3Q99618 268 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC25A23Q9BV35 468 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 PIGVQ9NUD9 493 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ENOPH1Q9UHY7 261 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 COL2A1P02458 1487 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 STK16O75716 305 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 PIM1P11309 404 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 CCNHP51946 323 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 RAD23AP54725 363 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF844Q08AG5 666 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 FBXO48Q5FWF7 155 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 GPR180Q86V85 440 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 FUKQ8N0W3 1084 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ACMSDQ8TDX5 336 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 RIBC2Q9H4K1 309 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 DDX18Q9NVP1 670 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 VIRMAQ69YN4 1812 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 HSPA13P48723 471 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 MRPL28Q13084 256 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 TSTD2Q5T7W7 516 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 FAM3CQ92520 227 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF514Q96K75 400 aaPredicted RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF354BQ96LW1 612 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 EPB41L4BQ9H329 900 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 NEUROD4Q9HD90 331 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 STRCQ7RTU9 1775 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 A8MUA0 341 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 MTX2O75431 263 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 SERPINB7O75635 380 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 PSMC3P17980 439 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 PLEKHG4Q58EX7 1191 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 CRYBG2Q8N1P7 616 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ART4Q93070 314 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 NOL11Q9H8H0 719 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 PNPLA8Q9NP80 782 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 OXTRP30559 389 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 RPS21P63220 83 aaKnown RBP10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 DMTNQ08495 405 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 DEF8Q6ZN54 512 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 TMEM126BQ8IUX1 230 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 ANKZF1Q9H8Y5 726 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 KLHL1Q9NR64 748 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 RPS6KA6Q9UK32 745 aa10.6□□□□□ -0.71
SYNPO2-201ENST00000307142 J3KR12 359 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 HLA-DQB2P05538 268 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 TSHRP16473 764 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 WDR5P61964 334 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 WDR36Q8NI36 951 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 C5orf34Q96MH7 638 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC32A1Q9H598 525 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ANKHQ9HCJ1 492 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PIAS3Q9Y6X2 628 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 C15orf38-AP3S2A0A0A6YYH1 394 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 FAM237BA0A1B0GVD1 139 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ATP6AP2A0A1C7CYW4 349 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 A0A1W2PP55 124 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 TMEM150CB9EJG8 249 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A9O60656 530 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ATP6AP2O75787 350 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PDE9AO76083 593 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 SNRPB2P08579 225 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 TYRP1P17643 537 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A6P19224 532 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A1P22309 533 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A4P22310 534 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 CDH5P33151 784 aaPredicted RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A3P35503 534 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A5P35504 534 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 DUSP3P51452 185 aaPredicted RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 EIF3MQ7L2H7 374 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ARPINQ7Z6K5 226 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 TXNDC5Q8NBS9 432 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 FNDC11Q9BVV2 318 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 LDAHQ9H6V9 325 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A7Q9HAW7 530 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A10Q9HAW8 530 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT1A8Q9HAW9 530 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 CDC14AQ9UNH5 594 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 FSCN2O14926 492 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 GJB5O95377 273 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 SOX6P35712 828 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PTGER3P43115 390 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 DEFB103AP81534 67 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 DSG1Q02413 1049 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms