RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ECHS1P30084 290 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 SHBQ15464 509 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 STEAP4Q687X5 459 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 SDCCAG8Q86SQ7 713 aaPredicted RBP24.19■■□□□ 1.46
HOXC9-201ENST00000303450 CAAP1Q9H8G2 361 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 TM7SF3Q9NS93 570 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 DNAAF2Q9NVR5 837 aaKnown RBP24.19■■□□□ 1.46
HOXC9-201ENST00000303450 SPASTQ9UBP0 616 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 GPSM3Q9Y4H4 160 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 PIAS2O75928 621 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 EPHA8P29322 1005 aaPredicted RBP24.18■■□□□ 1.46
HOXC9-201ENST00000303450 MAGEA4P43358 317 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 TTPAP49638 278 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 BNIP3Q12983 259 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 SEMA3AQ14563 771 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 ITIH4Q14624 930 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 PYCR3Q53H96 274 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 PRRT3Q5FWE3 981 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 LDB1Q86U70 411 aaPredicted RBP24.18■■□□□ 1.46
HOXC9-201ENST00000303450 KCNMB4Q86W47 210 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 KIAA2013Q8IYS2 634 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 PNPLA1Q8N8W4 532 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 RASGEF1AQ8N9B8 481 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 UBXN4Q92575 508 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 OR2M4Q96R27 311 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 PRKAB1Q9Y478 270 aa24.18■■□□□ 1.46
HOXC9-201ENST00000303450 GVINP1Q7Z2Y8 2422 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 ZNF292O60281 2723 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 CHUKO15111 745 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 GRID2O43424 1007 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 GDF9O60383 454 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 ZNF883P0CG24 379 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 TCEA2Q15560 299 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 HSP90AA5PQ58FG0 334 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 DET1Q7L5Y6 550 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 TRAPPC5Q8IUR0 188 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 UNC5BQ8IZJ1 945 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 GPR150Q8NGU9 434 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 GABPB2Q8TAK5 448 aaPredicted RBP24.17■■□□□ 1.46
HOXC9-201ENST00000303450 GSDMBQ8TAX9 411 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 CALML6Q8TD86 181 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 CERS2Q96G23 380 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 C9orf72Q96LT7 481 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 LRRC61Q9BV99 259 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 BOCQ9BWV1 1114 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 TMEM168Q9H0V1 697 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 PLAC1Q9HBJ0 212 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 PPANQ9NQ55 473 aaKnown RBP24.17■■□□□ 1.46
HOXC9-201ENST00000303450 DNAH14Q0VDD8 3507 aa24.17■■□□□ 1.46
HOXC9-201ENST00000303450 IGLV3-16A0A075B6K0 115 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 OR2AG2A6NM03 316 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 PFDN6O15212 129 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 ERVK-10P10266 1014 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 ATP1B2P14415 290 aaPredicted RBP24.16■■□□□ 1.46
HOXC9-201ENST00000303450 NSG1P42857 185 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 B4GALNT1Q00973 533 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 UAP1L1Q3KQV9 507 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 ZNF470Q6ECI4 717 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 CRTC3Q6UUV7 619 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 CAPN12Q6ZSI9 719 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 LRRTM4Q86VH4 590 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 LMNTD2Q8IXW0 634 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 ZNF548Q8NEK5 533 aaPredicted RBP24.16■■□□□ 1.46
HOXC9-201ENST00000303450 LMX1AQ8TE12 382 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 SGF29Q96ES7 293 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 CCDC97Q96F63 343 aaPredicted RBP24.16■■□□□ 1.46
HOXC9-201ENST00000303450 ZNF514Q96K75 400 aaPredicted RBP24.16■■□□□ 1.46
HOXC9-201ENST00000303450 FAM167BQ9BTA0 163 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 ANKZF1Q9H8Y5 726 aa24.16■■□□□ 1.46
HOXC9-201ENST00000303450 TRNAU1APQ9NX07 287 aaKnown RBP24.16■■□□□ 1.46
HOXC9-201ENST00000303450 C4orf47A7E2U8 309 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 AQP9O43315 295 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 NDUFS3O75489 264 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 DGKAP23743 735 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 PLA2G5P39877 138 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 C1orf61Q13536 156 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 SUZ12Q15022 739 aaKnown RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 ELOCQ15369 112 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 TMEM220Q6QAJ8 160 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 CHST15Q7LFX5 561 aaPredicted RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 GATAD2AQ86YP4 633 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 FSTL5Q8N475 847 aaPredicted RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 SAP25Q8TEE9 199 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 RRAGDQ9NQL2 400 aaPredicted RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 IARS2Q9NSE4 1012 aaKnown RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 GPR34Q9UPC5 381 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 PCYT1BQ9Y5K3 369 aaPredicted RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 V9GYY5 206 aaPredicted RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 KMOO15229 486 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 PCDHGA12O60330 932 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 ZNF7P17097 686 aaPredicted RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 OGNP20774 298 aaKnown RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 SSTR1P30872 391 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 CTSCP53634 463 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 FRG1Q14331 258 aaKnown RBP24.15■■□□□ 1.46
HOXC9-201ENST00000303450 PACS1Q6VY07 963 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 CILP2Q8IUL8 1156 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 NAT14Q8WUY8 206 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms