RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 DBTP11182 482 aaKnown RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 NDUFAF6Q330K2 333 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ZDHHC13Q8IUH4 622 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 MREGQ8N565 214 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TSEN15Q8WW01 171 aaKnown RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 MFSD3Q96ES6 412 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ABI3Q9P2A4 366 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SLC24A2Q9UI40 661 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 VAV3Q9UKW4 847 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TCRBV7S2A1N4TA0A589 114 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 GRXCR2A6NFK2 248 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 H3BMM5 538 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TRIM24O15164 1050 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 PAK4O96013 591 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CAPZA1P52907 286 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TLR1Q15399 786 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 HKDC1Q2TB90 917 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CCSAPQ6IQ19 270 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF549Q6P9A3 640 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ABCB9Q9NP78 766 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 MORF4L1Q9UBU8 362 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 FBXO5Q9UKT4 447 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF214Q9UL59 606 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 QSOX1O00391 747 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CPN2P22792 545 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 PTCHD4Q6ZW05 846 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 METTL3Q86U44 580 aaKnown RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 FAM9CQ8IZT9 166 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TTTY10Q9BZA0 68 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 RIMKLBQ9ULI2 386 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 YIPF1Q9Y548 306 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 DEPDC5O75140 1603 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 LAMTOR5O43504 91 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 SLC6A2P23975 617 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 UGT2B15P54855 530 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CDH4P55283 916 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CARD16Q5EG05 197 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 SUSD1Q6UWL2 747 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TMEM126BQ8IUX1 230 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF557Q8N988 423 aaPredicted RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 BOLLQ8N9W6 283 aaKnown RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 SORCS1Q8WY21 1168 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 SLC17A7Q9P2U7 560 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 HYKKA2RU49 373 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 H3BNH8 94 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 H3BQF6 201 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TULP2O00295 520 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CLDN4O14493 209 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 RGS20O76081 388 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CCNDBP1O95273 360 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ATP5F1P24539 256 aaPredicted RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CLCN5P51795 746 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 PYDC2Q56P42 97 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ARHGAP40Q5TG30 622 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CDKAL1Q5VV42 579 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CPNE8Q86YQ8 564 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CAMK1DQ8IU85 385 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF540Q8NDQ6 660 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 GTPBP3Q969Y2 492 aaKnown RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 NARS2Q96I59 477 aaKnown RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 MIPEPQ99797 713 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 OR51V1Q9H2C8 321 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ADAM7Q9H2U9 754 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 MFHAS1Q9Y4C4 1052 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ZC3H13Q5T200 1668 aaKnown RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 MYCLP1P12525 358 aaPredicted RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 POLR2CP19387 275 aaPredicted RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 NR4A1P22736 598 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 MAPK12P53778 367 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ELP6Q0PNE2 266 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 UBAP2Q5T6F2 1119 aaKnown RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 GDPD4Q6W3E5 623 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 IQCHQ86VS3 1027 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 SPPL2CQ8IUH8 684 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 RCN3Q96D15 328 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ADAP2Q9NPF8 381 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TBC1D23Q9NUY8 699 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 OR4F21O95013 312 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 SNRPB2P08579 225 aaKnown RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CLCNKAP51800 687 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 PER3P56645 1201 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 GPR68Q15743 365 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TRIM16LQ309B1 348 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 SLC10A6Q3KNW5 377 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TOR1AIP1Q5JTV8 583 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 METTL21CQ5VZV1 264 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 OLFML2AQ68BL7 652 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TEX47Q8TBZ9 253 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TFAP2BQ92481 460 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TAPBPLQ9BX59 468 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ERVK-5Q9HDB9 667 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CDH7Q9ULB5 785 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ATXN7L1Q9ULK2 861 aaPredicted RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 TNPO3Q9Y5L0 923 aaKnown RBP7.73□□□□□ -1.17
SCN9A-201ENST00000303354 GMPPBQ9Y5P6 360 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 DLC1Q96QB1 1528 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 CSN2P05814 226 aa7.73□□□□□ -1.17
SCN9A-201ENST00000303354 ST13P50502 369 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms