RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RPL7AP62424 266 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 LPCAT4Q643R3 524 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 WSCD1Q658N2 575 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 RAET1GQ6H3X3 334 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 C17orf64Q86WR6 236 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 DNAAF5Q86Y56 855 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 AQP12AQ8IXF9 295 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 HASPINQ8TF76 798 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 C8orf48Q96LL4 319 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CST11Q9H112 138 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 HIPK3Q9H422 1215 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF224Q9NZL3 707 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 MLXQ9UH92 298 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 EGFL7Q9UHF1 273 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GTPBP1O00178 669 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ZBTB7AO95365 584 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 SLC35G4P0C7Q5 338 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CASP7P55210 303 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GTF2H2Q13888 395 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF311Q5JNZ3 666 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GTF2H2CQ6P1K8 395 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ZCCHC12Q6PEW1 402 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 LINC00471Q8N535 108 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 OR5K1Q8NHB7 308 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF420Q8TAQ5 688 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 DNAJA4Q8WW22 397 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 COMMD4Q9H0A8 199 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ST6GALNAC4Q9H4F1 302 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GRIP1Q9Y3R0 1128 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PIK3C2AO00443 1686 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 SPATA31C2B4DYI2 1134 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 MC4RP32245 332 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 TEX44Q53QW1 395 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 HGSNATQ68CP4 663 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 SPPL2CQ8IUH8 684 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 NIPA2Q8N8Q9 360 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GPR156Q8NFN8 814 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 SUSD6Q92537 303 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 HDAC10Q969S8 669 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PCDHGB7Q9Y5F8 929 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GRIN2DO15399 1336 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 A8MUI8 341 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PAPSS1O43252 624 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CELF2O95319 508 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CDH1P12830 882 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 IL17AQ16552 155 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ADGRG2Q8IZP9 1017 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 NATD1Q8N6N6 113 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 INO80EQ8NBZ0 244 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 STARD7Q9NQZ5 370 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CLDN11O75508 207 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 STK16O75716 305 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 C8GP07360 202 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CYP3A5P20815 502 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CCNCP24863 283 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PFKPQ01813 784 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 SRSF11Q05519 484 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CAMK1Q14012 370 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 VSIG10LQ86VR7 867 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 EFCAB3Q8N7B9 438 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF548Q8NEK5 533 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 OR8H1Q8NGG4 311 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 TSEN15Q8WW01 171 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 COPS8Q99627 209 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 SDCBP2Q9H190 292 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PRDM12Q9H4Q4 367 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ASAH2Q9NR71 780 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ABCC6O95255 1503 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 FAM234BA2RU67 622 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 FAM172BPA6NC97 362 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 EFCAB9A8MZ26 197 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ADH1CP00326 375 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 POMCP01189 267 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CDH8P55286 799 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PRKD1Q15139 912 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 MPPE1Q53F39 396 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 AGO3Q9H9G7 860 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 REXO2Q9Y3B8 237 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 MST1RQ04912 1400 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 KDM3BQ7LBC6 1761 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PRAMEF33A0A0G2JMD5 474 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GNB5O14775 395 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 PRAMEF10O60809 474 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ATXN7L2Q5T6C5 722 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 NIPAL1Q6NVV3 410 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 SYCE2Q6PIF2 218 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 LRRC3Q9BY71 257 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 IFT46Q9NQC8 304 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 C14orf105Q9NVL8 296 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 RPL36Q9Y3U8 105 aaKnown RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 TCAF1Q9Y4C2 921 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 UBR2Q8IWV8 1755 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 KPNA3O00505 521 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 MEIS2O14770 477 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ADORA2AP29274 412 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PTPN9P43378 593 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CXCR3P49682 368 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 IDH3AP50213 366 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 MON1AQ86VX9 555 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms