RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 HSPA7P48741 367 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 LRRC73Q5JTD7 316 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 LY6G5CQ5SRR4 150 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 CDC73Q6P1J9 531 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 Q6ZVU0 165 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 SVOPQ8N4V2 548 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 OR4A15Q8NGL6 344 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 CRTAC1Q9NQ79 661 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 DDX18Q9NVP1 670 aaKnown RBP17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 PPIEQ9UNP9 301 aaKnown RBP17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 TPRKBQ9Y3C4 175 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 PEX1O43933 1283 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 RGS20O76081 388 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 TM4SF4P48230 202 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC9A5Q14940 896 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 ANKRD22Q5VYY1 191 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 OLFML1Q6UWY5 402 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 DCAF4L2Q8NA75 395 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZSCAN5AQ9BUG6 496 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 DLGAP2Q9P1A6 1054 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 IQCF5A8MTL0 148 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 TULP2O00295 520 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC10A7Q0GE19 358 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZNF605Q86T29 641 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZSCAN32Q9NX65 697 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 COPG2Q9UBF2 871 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 N6AMT1Q9Y5N5 214 aa17.55■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC28A2O43868 658 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 CCNYL3P0C7X3 344 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 FOXM1Q08050 763 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 BNIP2Q12982 314 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 MTAPQ13126 283 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 CHIT1Q13231 466 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 MYLK3Q32MK0 819 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 EIF3MQ7L2H7 374 aaKnown RBP17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 DHRSXQ8N5I4 330 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 BRINP2Q9C0B6 783 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 NDUFA13Q9P0J0 144 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 GMEB2Q9UKD1 530 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 NEMP2A6NFY4 417 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 OR1F1O43749 312 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 SERPINA6P08185 405 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 GSSP48637 474 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 ARRB1P49407 418 aaPredicted RBP17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 CPNE9Q8IYJ1 553 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 EBF3Q9H4W6 596 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 SRRM3A6NNA2 597 aaPredicted RBP17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 SCAMP1O15126 338 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 SNAP91O60641 907 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 SASH3O75995 380 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 ITPKBP27987 946 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZNF132P52740 706 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 HTRA3P83110 453 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 NOL11Q9H8H0 719 aaKnown RBP17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 ADAMTS5Q9UNA0 930 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 RHOP08100 348 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 KIR3DL1P43629 444 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 LCP2Q13094 533 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 TTC27Q6P3X3 843 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZBED3Q96IU2 234 aaPredicted RBP17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 MYADML2A6NDP7 307 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 SCN2BO60939 215 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 BMP7P18075 431 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 TSNQ15631 228 aaKnown RBP17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 FGD2Q7Z6J4 655 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 MECRQ9BV79 373 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 DNAJC28Q9NX36 388 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 SALL4Q9UJQ4 1053 aa17.54■□□□□ 0.4
CDC42EP3-201ENST00000295324 LYPLA1O75608 230 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 TGDSO95455 350 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 HLA-DQB2P05538 268 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZNF30P17039 623 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 GNAZP19086 355 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 MS4A13Q5J8X5 152 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 PHF10Q8WUB8 498 aaKnown RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 NECTIN4Q96NY8 510 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZDHHC3Q9NYG2 299 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 VIPR1P32241 457 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC34A1Q06495 639 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 RNF43Q68DV7 783 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 WDR36Q8NI36 951 aaKnown RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 PRRG4Q9BZD6 226 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 VRTNQ9H8Y1 702 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 NEK6Q9HC98 313 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 UPK3BL1B0FP48 263 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 UPK3BL2E5RIL1 263 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 NBNO60934 754 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 GPR32O75388 356 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 SMNDC1O75940 238 aaKnown RBP eCLIP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 CDH5P33151 784 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 CCNHP51946 323 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 C2orf80Q0P641 193 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 GRM2Q14416 872 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 OASLQ15646 514 aaKnown RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 TIGD2Q4W5G0 525 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 RMND5BQ96G75 393 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC17A7Q9P2U7 560 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 AJAP1Q9UKB5 411 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 RPL4P36578 427 aaKnown RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 CLCQ05315 142 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms