RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CCNYL2Q5T2Q4 361 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 TPGS2Q68CL5 300 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 RFWD3Q6PCD5 774 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CRTC3Q6UUV7 619 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 SPPL2CQ8IUH8 684 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 FAM47BQ8NA70 645 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF483Q8TF39 744 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 AP2M1Q96CW1 435 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CENPNQ96H22 339 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 LENG8Q96PV6 779 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 BCO2Q9BYV7 579 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CNTN3Q9P232 1028 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 NR2E1Q9Y466 385 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CHURC1-FNTBB4DL54 471 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 H3BNH8 94 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 FABP3P05413 133 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 DEF8Q6ZN54 512 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 SERPINA9Q86WD7 417 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 FSTL5Q8N475 847 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 UBR7Q8N806 425 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 HEPHQ9BQS7 1158 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 PCBD2Q9H0N5 130 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CRISPLD1Q9H336 500 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 NOL6Q9H6R4 1146 aaKnown RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 RAPGEFL1Q9UHV5 662 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 ERVW-1Q9UQF0 538 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 ASB3Q9Y575 518 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 YJEFN3A6XGL0 299 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 NBNO60934 754 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 TAS2R41P59536 307 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 GPR107Q5VW38 600 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 SMYD1Q8NB12 490 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 PPP1R14AQ96A00 147 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 MCM8Q9UJA3 840 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 MPZL2O60487 215 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ECDO95905 644 aaPredicted RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 HLA-DQA2P01906 255 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 CAPGP40121 348 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 NSG1P42857 185 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 PLPP4Q5VZY2 271 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 TMPRSS11BQ86T26 416 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ZC3H3Q8IXZ2 948 aaKnown RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 OR7D4Q8NG98 312 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 HM13Q8TCT9 377 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 UBASH3BQ8TF42 649 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 RPRD1BQ9NQG5 326 aaKnown RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 SMPD3Q9NY59 655 aaPredicted RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 TMEM59LQ9UK28 342 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 GSAPA4D1B5 854 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ELNP15502 786 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 RPL4P36578 427 aaKnown RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 LPCAT4Q643R3 524 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 RGL4Q8IZJ4 473 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 PDPRQ8NCN5 879 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ALG2Q9H553 416 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ZDHHC4Q9NPG8 344 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 SLC25A12O75746 678 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ALOX5P09917 674 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 PTPN2P17706 415 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 ATP13A5Q4VNC0 1218 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 CLEC20AQ6ZU45 233 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 PSMG2Q969U7 264 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 GINS4Q9BRT9 223 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 SUCOQ9UBS9 1254 aaKnown RBP12.68□□□□□ -0.38
PTCD1-201ENST00000292478 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
PTCD1-201ENST00000292478 TSC22D2O75157 780 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 HNF4AP41235 474 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 CA9Q16790 459 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 VPS26BQ4G0F5 336 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 SCAIQ8N9R8 606 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 GNEQ9Y223 722 aaKnown RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 SNPHO15079 494 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 MT-CYBP00156 380 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 UGT1A5P35504 534 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 RPS6KA3P51812 740 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 LDLRAP1Q5SW96 308 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF248Q8NDW4 579 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 PPM1MQ96MI6 270 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 DNAJB4Q9UDY4 337 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 TIMM22Q9Y584 194 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 THRBP10828 461 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 IGFBP5P24593 272 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 PPIGQ13427 754 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 DPY19L1Q2PZI1 675 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 C11orf65Q8NCR3 313 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 ADAMTS15Q8TE58 950 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 BORCS5Q969J3 196 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 LENG1Q96BZ8 264 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms