RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TTC7BQ86TV6 843 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 C11orf74Q86VG3 221 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 TMPRSS6Q8IU80 811 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 WDR75Q8IWA0 830 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 EID2BQ96D98 161 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 NUS1Q96E22 293 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 MKRN2Q9H000 416 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 UTP6Q9NYH9 597 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 DLGAP2Q9P1A6 1054 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CPSF2Q9P2I0 782 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 MYO18BQ8IUG5 2567 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 AURKAO14965 403 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SMIM24O75264 130 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SASH3O75995 380 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GSTM1P09488 218 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ATP6V1E1P36543 226 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ADPRHP54922 357 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GSTM4Q03013 218 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 NEPROQ6NW34 567 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ADAMTSL4Q6UY14 1074 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 OR13C4Q8NGS5 318 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 BAIAP2L1Q9UHR4 511 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC39A10Q9ULF5 831 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 LRRK1Q38SD2 2015 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 KMT2EQ8IZD2 1858 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CCDC162PA2VCL2 907 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 WNT9AO14904 365 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SH3BGRLO75368 114 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 KRT37O76014 449 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 KRT38O76015 456 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 PRKCGP05129 697 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 MC4RP32245 332 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 MAGEA12P43365 314 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 NUBP1P53384 320 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 TAS2R38P59533 333 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 PLIN5Q00G26 463 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 PHKG1Q16816 387 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 Q6ZS52 159 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 TSPAN33Q86UF1 283 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 TBC1D19Q8N5T2 526 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 OR2T34Q8NGX1 318 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 UHRF1Q96T88 793 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 INTS9Q9NV88 658 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 MKS1Q9NXB0 559 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 FBXL12Q9NXK8 326 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GULP1Q9UBP9 304 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 KLHL3Q9UH77 587 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 MTF2Q9Y483 593 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 IGLV3-16A0A075B6K0 115 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 CCDC189A1A4V9 331 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 LRRC72A6NJI9 287 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 AGPSO00116 658 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 RASSF9O75901 435 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 SRP72O76094 671 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 VAPBO95292 243 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 C6P13671 934 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 ITGB6P18564 788 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 AOC1P19801 751 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 TAC1P20366 129 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 ACRV1P26436 265 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 SPRP35270 261 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 CSRP3P50461 194 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 LIMK2P53671 638 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 NFATC2Q13469 925 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 PWP1Q13610 501 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 UBAP2Q5T6F2 1119 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 TRMT10BQ6PF06 316 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 HSD11B1LQ7Z5J1 315 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 TBC1D1Q86TI0 1168 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 TAGAPQ8N103 731 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 CYP4X1Q8N118 509 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 HDAC10Q969S8 669 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 RHOJQ9H4E5 214 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 IARS2Q9NSE4 1012 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 FKBPLQ9UIM3 349 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 KCTD3Q9Y597 815 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 PCDHB1Q9Y5F3 818 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 MYO18AQ92614 2054 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 GPR89AB7ZAQ6 455 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 H3BMM5 538 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 GOLGA8RI6L899 631 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 QSOX1O00391 747 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 RNGTTO60942 597 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 AP2A2O94973 939 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 TRIM16O95361 564 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 GPR89BP0CG08 455 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC1A2P43004 574 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 PDAP1Q13442 181 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 LDLRAP1Q5SW96 308 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 HORMAD1Q86X24 394 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 ACMSDQ8TDX5 336 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM53CQ9NYF3 392 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 HMGB1P1B2RPK0 211 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 SCAMP1O15126 338 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 RNASEH2AO75792 299 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 TM7SF2O76062 418 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 ERVK-10P10266 1014 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms