RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 H6PDO95479 791 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 FADS2O95864 444 aaKnown RBP12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 KPNA1P52294 538 aaPredicted RBP12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 AIF1P55008 147 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 PRKCQQ04759 706 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 PCBP1Q15365 356 aaKnown RBP eCLIP12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 CPSF6Q16630 551 aaKnown RBP eCLIP12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 TSTD2Q5T7W7 516 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 SDE2Q6IQ49 451 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 ARRDC4Q8NCT1 418 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 HDAC2Q92769 488 aaKnown RBP12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 FOPNLQ96NB1 174 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 ASB8Q9H765 288 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 NKIRAS2Q9NYR9 191 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 TLL2Q9Y6L7 1015 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 MAST2Q6P0Q8 1798 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 A0A088AWK7 358 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 PIP5K1BO14986 540 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 GOT2P00505 430 aaKnown RBP12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 GNAZP19086 355 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 GPR15P49685 360 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 ENTPD1P49961 510 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 PPP1R3AQ16821 1122 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 TTLL9Q3SXZ7 439 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 NAPRTQ6XQN6 538 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 MAPK15Q8TD08 544 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 NRG4Q8WWG1 115 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 CAPN10Q9HC96 672 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
SLC6A1-201ENST00000287766 ZBTB42B2RXF5 422 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 PDLIM1O00151 329 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 ASLP04424 464 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 MC4RP32245 332 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 HPCAP84074 193 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 POM121L1PQ3SYA9 428 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 TLDC1Q6P9B6 456 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 FAM151BQ6UXP7 276 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 KCTD8Q6ZWB6 473 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 RAB43Q86YS6 212 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 PKP2Q99959 881 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 NFKBIZQ9BYH8 718 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 MYO9BQ13459 2157 aa12.46□□□□□ -0.42
SLC6A1-201ENST00000287766 LRATO95237 230 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 CENPAP49450 140 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 FLT3LGP49771 235 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 GHRHRQ02643 423 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 SMU1Q2TAY7 513 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 USP39Q53GS9 565 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ERICH5Q6P6B1 374 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 EPGNQ6UW88 154 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 KBTBD7Q8WVZ9 684 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 CRISPLD1Q9H336 500 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 KANSL3Q9P2N6 904 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ADAMTS6Q9UKP5 1117 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 H0Y858 1186 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 PIRO00625 290 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 IRAK2O43187 625 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 RNASEH1O60930 286 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 STAU1O95793 577 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 FTH1P02794 183 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 COL6A2P12110 1019 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 RPL17P18621 184 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 S100A3P33764 101 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 PHC1P78364 1004 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 TYSND1Q2T9J0 566 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 REXO5Q96IC2 774 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 GFM1Q96RP9 751 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 WDR83Q9BRX9 315 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 RNF38Q9H0F5 515 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 SLC25A51Q9H1U9 297 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 VRTNQ9H8Y1 702 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 IKZF3Q9UKT9 509 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 GSTK1Q9Y2Q3 226 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 COL16A1Q07092 1604 aaPredicted RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ASGR1P07306 291 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 PAFAH1B3Q15102 231 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 GPRIN3Q6ZVF9 776 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 KRT74Q7RTS7 529 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ELMOD1Q8N336 334 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 KPNA6O60684 536 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 PRLP01236 227 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 MTHFD1P11586 935 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ZNF7P17097 686 aaPredicted RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 HOXD10P28358 340 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 GGT5P36269 586 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 CDK9P50750 372 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ECT2LQ008S8 904 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 PPP1R8Q12972 351 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ADGRE1Q14246 886 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 GALNT5Q7Z7M9 940 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ZNF614Q8N883 585 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 LRRC20Q8TCA0 184 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ACBD6Q9BR61 282 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 ARL15Q9NXU5 204 aa12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 AGO1Q9UL18 857 aaKnown RBP12.45□□□□□ -0.42
SLC6A1-201ENST00000287766 A8MT66 165 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 ENO2P09104 434 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms