RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZDHHC4Q9NPG8 344 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 LATS2Q9NRM7 1088 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 PPM1HQ9ULR3 514 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 VCANP13611 3396 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 HTRA2O43464 458 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-201ENST00000279247 ESR1P03372 595 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 ZNF7P17097 686 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-201ENST00000279247 GNAZP19086 355 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 LHCGRP22888 699 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 GRB7Q14451 532 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 TRMT5Q32P41 509 aaKnown RBP17.76■□□□□ 0.43
CAPN1-201ENST00000279247 TCEAL5Q5H9L2 206 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 WLSQ5T9L3 541 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 TMEM215Q68D42 235 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 NET1Q7Z628 596 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-201ENST00000279247 CLYBLQ8N0X4 340 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 RHEBL1Q8TAI7 183 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 NRG4Q8WWG1 115 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 KCNJ9Q92806 393 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 POPDC3Q9HBV1 291 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 MAFFQ9ULX9 164 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 CAPN8A6NHC0 703 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 TTC34A8MYJ7 566 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 TNRC18O15417 2968 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-201ENST00000279247 RECQLP46063 649 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-201ENST00000279247 ACTR3P61158 418 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 ATP6V0D1P61421 351 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 HERVK_113Q902F9 699 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 HGH1Q9BTY7 390 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 MEAF6Q9HAF1 191 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 ADA2Q9NZK5 511 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 POMPQ9Y244 141 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 PSMD12O00232 456 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-201ENST00000279247 CLCN7P51798 805 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 MYLK4Q86YV6 388 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-201ENST00000279247 CDYL2Q8N8U2 506 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 OR52B6Q8NGF0 335 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 RP9Q8TA86 221 aaKnown RBP17.75■□□□□ 0.43
CAPN1-201ENST00000279247 PLEKHG4BQ96PX9 1271 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 EGFL8Q99944 293 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 STOML1Q9UBI4 398 aa17.75■□□□□ 0.43
CAPN1-201ENST00000279247 CARNS1A5YM72 827 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 SYCE1LA8MT33 242 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 GIPC1O14908 333 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 GDF5P43026 501 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 TGFBIQ15582 683 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 SNX20Q7Z614 316 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ENDOVQ8N8Q3 282 aaKnown RBP17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ACTRT2Q8TDY3 377 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ATP6V1E2Q96A05 226 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 MAELQ96JY0 434 aaKnown RBP17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ZNF570Q96NI8 536 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 LRRC3BQ96PB8 259 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 SLC39A3Q9BRY0 314 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 WDR41Q9HAD4 459 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ATG2BQ96BY7 2078 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 H7C0S8 307 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 LMNAP02545 664 aaKnown RBP17.74■□□□□ 0.43
CAPN1-201ENST00000279247 HK2P52789 917 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ATP13A5Q4VNC0 1218 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 MBOAT1Q6ZNC8 495 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 SCAMP4Q969E2 229 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 FAR2Q96K12 515 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 TRMOQ9BU70 441 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 NSUN3Q9H649 340 aaKnown RBP17.74■□□□□ 0.43
CAPN1-201ENST00000279247 BRD9Q9H8M2 597 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 B4GALT6Q9UBX8 382 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 KRT87PA6NCN2 255 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 RFXAPO00287 272 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ALDOCP09972 364 aaKnown RBP17.74■□□□□ 0.43
CAPN1-201ENST00000279247 SPAM1P38567 509 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 PIK3CGP48736 1102 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 THOP1P52888 689 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 CARD16Q5EG05 197 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 USP45Q70EL2 814 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 ADGRD2Q7Z7M1 963 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 HMGCLL1Q8TB92 370 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 P2RY12Q9H244 342 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 TUBB1Q9H4B7 451 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 IRAK3Q9Y616 596 aa17.74■□□□□ 0.43
CAPN1-201ENST00000279247 OR4F21O95013 312 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 HGFP14210 728 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 SOX11P35716 441 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 DPP6P42658 865 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 MAGEA10P43363 369 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-201ENST00000279247 NFKB2Q00653 900 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 SLC34A1Q06495 639 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 MESP2Q0VG99 397 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 LCP2Q13094 533 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 SYVN1Q86TM6 617 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 ADIPOR2Q86V24 386 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 RBFAQ8N0V3 343 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 STK40Q8N2I9 435 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 FBXW8Q8N3Y1 598 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 C1orf50Q9BV19 199 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 ZNF385DQ9H6B1 395 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 NMRK1Q9NWW6 199 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 MBD1Q9UIS9 605 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-201ENST00000279247 APPL1Q9UKG1 709 aa17.73■□□□□ 0.43
CAPN1-201ENST00000279247 ADAMTS6Q9UKP5 1117 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms