RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 THRAP10827 490 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 ADH5P11766 374 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 VIPR2P41587 438 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 RECQLP46063 649 aaPredicted RBP16.44■□□□□ 0.22
CCDC40-201ENST00000269318 CLCQ05315 142 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 LCP2Q13094 533 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 HERC3Q15034 1050 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 DUSP6Q16828 381 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 KHDC1Q4VXA5 237 aaKnown RBP16.44■□□□□ 0.22
CCDC40-201ENST00000269318 ACSBG2Q5FVE4 666 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 ANKS6Q68DC2 871 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 TXNDC11Q6PKC3 985 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 C12orf40Q86WS4 652 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 GPSM1Q86YR5 675 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 VN1R2Q8NFZ6 395 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 RP9Q8TA86 221 aaKnown RBP16.44■□□□□ 0.22
CCDC40-201ENST00000269318 TRPC4APQ8TEL6 797 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 ZNF483Q8TF39 744 aaPredicted RBP16.44■□□□□ 0.22
CCDC40-201ENST00000269318 PLEKHG4BQ96PX9 1271 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 HEPHQ9BQS7 1158 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 MID1IP1Q9NPA3 183 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 SLC7A8Q9UHI5 535 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 DNAJC15Q9Y5T4 150 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 A0A1B0GTL3 188 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 TSPAN11A1L157 253 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 SPINT3P49223 89 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 DGKGP49619 791 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 AGTR2P50052 363 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 NAA20P61599 178 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 POLR2LP62875 67 aaKnown RBP16.44■□□□□ 0.22
CCDC40-201ENST00000269318 CUL3Q13618 768 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 KCNC3Q14003 757 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 TGFBIQ15582 683 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 PPP1R3AQ16821 1122 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 FBXO48Q5FWF7 155 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 LRRC73Q5JTD7 316 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 KANK2Q63ZY3 851 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 SBSNQ6UWP8 590 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 LARP4Q71RC2 724 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC40-201ENST00000269318 SNX32Q86XE0 403 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 C19orf60Q96EN9 201 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 CERS4Q9HA82 394 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 PCTPQ9UKL6 214 aa16.44■□□□□ 0.22
CCDC40-201ENST00000269318 NCF1BA6NI72 391 aaPredicted RBP16.43■□□□□ 0.22
CCDC40-201ENST00000269318 NCF1CA8MVU1 366 aaPredicted RBP16.43■□□□□ 0.22
CCDC40-201ENST00000269318 AZIN1O14977 448 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 LEFTY1O75610 366 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 SLC25A14O95258 325 aaPredicted RBP16.43■□□□□ 0.22
CCDC40-201ENST00000269318 CTSLP07711 333 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 NCF1P14598 390 aaPredicted RBP16.43■□□□□ 0.22
CCDC40-201ENST00000269318 NRIP1P48552 1158 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 FOXA1P55317 472 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 SHHQ15465 462 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 ATP13A5Q4VNC0 1218 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 FAM78AQ5JUQ0 283 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 GPRC6AQ5T6X5 926 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 ZDHHC20Q5W0Z9 365 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 NET1Q7Z628 596 aaPredicted RBP16.43■□□□□ 0.22
CCDC40-201ENST00000269318 NPAS3Q8IXF0 933 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 PBXIP1Q96AQ6 731 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 C3orf30Q96M34 536 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 ZDHHC3Q9NYG2 299 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 NUDT4Q9NZJ9 180 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 SLC27A6Q9Y2P4 619 aa16.43■□□□□ 0.22
CCDC40-201ENST00000269318 PLXNB3Q9ULL4 1909 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 IGLV3-16A0A075B6K0 115 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ADH1CP00326 375 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 SRPRAP08240 638 aaKnown RBP16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ITGB6P18564 788 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 NNMTP40261 264 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 NSG1P42857 185 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 CYLC2Q14093 348 aaPredicted RBP16.42■□□□□ 0.22
CCDC40-201ENST00000269318 PGM2L1Q6PCE3 622 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ADAMTSL2Q86TH1 951 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ETFBKMTQ8IXQ9 262 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 WFIKKN2Q8TEU8 576 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 MTG2Q9H4K7 406 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 SEMA4BQ9NPR2 832 aaPredicted RBP16.42■□□□□ 0.22
CCDC40-201ENST00000269318 LATS2Q9NRM7 1088 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ASB1Q9Y576 335 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 CDH23Q9H251 3354 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 TRANK1O15050 2925 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 TULP3O75386 442 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 TRIM16O95361 564 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ASLP04424 464 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 PBX2P40425 430 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 B4GALNT1Q00973 533 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 E2F5Q15329 346 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ARSIQ5FYB1 569 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ZBTB2Q8N680 514 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 HMGCLL1Q8TB92 370 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 TWIST2Q8WVJ9 160 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 ASB16Q96NS5 453 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 PANX3Q96QZ0 392 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 KCNA7Q96RP8 456 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 TUBB1Q9H4B7 451 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 DCLRE1BQ9H816 532 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 SFXN1Q9H9B4 322 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 MRGBPQ9NV56 204 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms