RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RSPH9Q9H1X1 276 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 PNPOQ9NVS9 261 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 RAP2CQ9Y3L5 183 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 ZNF195O14628 629 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 WNT9AO14904 365 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 TPBGLP0DKB5 382 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 IMPDH1P20839 514 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 ZNF765Q7L2R6 523 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 WDR75Q8IWA0 830 aaKnown RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 CHPFQ8IZ52 775 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 GBP7Q8N8V2 638 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 DDHD1Q8NEL9 900 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 MOCOSQ96EN8 888 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 CNDP1Q96KN2 507 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 TMEM237Q96Q45 408 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 VPS35Q96QK1 796 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 RIOK2Q9BVS4 552 aaKnown RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 ILKAPQ9H0C8 392 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 STN1Q9H668 368 aaKnown RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 SARS2Q9NP81 518 aaKnown RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 DYRK4Q9NR20 520 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 NCKIPSDQ9NZQ3 722 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 MARCOQ9UEW3 520 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 XIRP2A4UGR9 3374 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 FADS2P1A8MWK0 482 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 CDC7O00311 574 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 MBTPS2O43462 519 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 KLK8O60259 260 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 SMIM24O75264 130 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 SLC25A14O95258 325 aaPredicted RBP16.17■□□□□ 0.18
TPM1-201ENST00000267996 CHRNGP07510 517 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 KITP10721 976 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 PSMD8P48556 350 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 AQP5P55064 265 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 PRKAA1Q13131 559 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 ACOX1Q15067 660 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 TSNQ15631 228 aaKnown RBP16.17■□□□□ 0.18
TPM1-201ENST00000267996 CRY1Q16526 586 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 ZNF284Q2VY69 593 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 MAVSQ7Z434 540 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 RALGPS2Q86X27 583 aaPredicted RBP16.17■□□□□ 0.18
TPM1-201ENST00000267996 ZNF781Q8N8C0 355 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 KCNV2Q8TDN2 545 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 BTN2A2Q8WVV5 523 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 FUBP1Q96AE4 644 aaKnown RBP16.17■□□□□ 0.18
TPM1-201ENST00000267996 SKA1Q96BD8 255 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 LRRC37BQ96QE4 947 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 GAS2L1Q99501 681 aaPredicted RBP16.17■□□□□ 0.18
TPM1-201ENST00000267996 WRAP53Q9BUR4 548 aaKnown RBP16.17■□□□□ 0.18
TPM1-201ENST00000267996 CYP4F12Q9HCS2 524 aa16.17■□□□□ 0.18
TPM1-201ENST00000267996 SPATS2LQ9NUQ6 558 aaKnown RBP16.17■□□□□ 0.18
TPM1-201ENST00000267996 LRRK1Q38SD2 2015 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 UBXN8O00124 270 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 PLK4O00444 970 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 DRD3P35462 400 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 P2RY2P41231 377 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 CCR10P46092 362 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 HK2P52789 917 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 GALNT1Q10472 559 aaPredicted RBP16.16■□□□□ 0.18
TPM1-201ENST00000267996 CNTN1Q12860 1018 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 SPRED3Q2MJR0 410 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 C2orf27AQ580R0 203 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 SPDYAQ5MJ70 313 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 PIP5KL1Q5T9C9 394 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 NLRP8Q86W28 1048 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 CCNYL1Q8N7R7 359 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 NAT14Q8WUY8 206 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 PANX3Q96QZ0 392 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 GABRG3Q99928 467 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 WWP1Q9H0M0 922 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 C8orf33Q9H7E9 229 aaPredicted RBP16.16■□□□□ 0.18
TPM1-201ENST00000267996 ACSS2Q9NR19 701 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 HEY2Q9UBP5 337 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 RNF112Q9ULX5 631 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 FADS3Q9Y5Q0 445 aa16.16■□□□□ 0.18
TPM1-201ENST00000267996 NPEPPSL1A6NEC2 478 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 SYCE1LA8MT33 242 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 BTN3A1O00481 513 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 UBOX5O94941 541 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 AP2A2O94973 939 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 TRIM16O95361 564 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 ATP1B2P14415 290 aaPredicted RBP16.15■□□□□ 0.18
TPM1-201ENST00000267996 DGKAP23743 735 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 WASP42768 502 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 HERVK_113P63132 956 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 SATB1Q01826 763 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 SETDB1Q15047 1291 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 CST6Q15828 149 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 TMEM196Q5HYL7 178 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 CFAP157Q5JU67 520 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 ZNF678Q5SXM1 525 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 SLC44A3Q8N4M1 653 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 ZBTB2Q8N680 514 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 DNASE1L2Q92874 299 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 GLYATL1Q969I3 302 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 AP2M1Q96CW1 435 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 PHF21BQ96EK2 531 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 TRMOQ9BU70 441 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms