RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 PTPN2P17706 415 aa16.58■□□□□ 0.24
PHRF1-201ENST00000264555 OLIG2Q13516 323 aa16.58■□□□□ 0.24
PHRF1-201ENST00000264555 CRTC3Q6UUV7 619 aa16.58■□□□□ 0.24
PHRF1-201ENST00000264555 RBM23Q86U06 439 aaKnown RBP16.58■□□□□ 0.24
PHRF1-201ENST00000264555 CHPFQ8IZ52 775 aa16.58■□□□□ 0.24
PHRF1-201ENST00000264555 TXLNGYQ9BZA5 131 aa16.58■□□□□ 0.24
PHRF1-201ENST00000264555 GKN1Q9NS71 199 aa16.58■□□□□ 0.24
PHRF1-201ENST00000264555 GPIP06744 558 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 TLX1P31314 330 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF252P-AS1Q0IIN9 211 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 GNA13Q14344 377 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 RBM44Q6ZP01 1051 aaKnown RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 ZCCHC7Q8N3Z6 543 aaKnown RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 TSGA13Q96PP4 275 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 HEPHQ9BQS7 1158 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 SLC7A8Q9UHI5 535 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 FBXO10Q9UK96 956 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 GPSM3Q9Y4H4 160 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 YIPF1Q9Y548 306 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 A8MT66 165 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 SUV39H1O43463 412 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 DLX3O60479 287 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 ACVRL1P37023 503 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 CCR3P51677 355 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 PRKAG1P54619 331 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 SKP1P63208 163 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 MBLAC2Q68D91 279 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 EIF3MQ7L2H7 374 aaKnown RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 SNX20Q7Z614 316 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 SERINC5Q86VE9 423 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 RALGPS2Q86X27 583 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF655Q8N720 491 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 FAM47BQ8NA70 645 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 AP2M1Q96CW1 435 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 C1orf74Q96LT6 269 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 DNAJB4Q9UDY4 337 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 PAIP2BQ9ULR5 123 aaKnown RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 C8AP07357 584 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 CSKP41240 450 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 ASMTP46597 345 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 PAQR3Q6TCH7 311 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 MRPL48Q96GC5 212 aaKnown RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 LRP5O75197 1615 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 RFPL1O75677 317 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 NFATC1O95644 943 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 TMED10P49755 219 aaKnown RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 NRG1Q02297 640 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 MPP2Q14168 576 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 SLC44A4Q53GD3 710 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 TYW3Q6IPR3 259 aaKnown RBP16.57■□□□□ 0.24
PHRF1-201ENST00000264555 MSRAQ9UJ68 235 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 MYH11P35749 1972 aa16.57■□□□□ 0.24
PHRF1-201ENST00000264555 C8GP07360 202 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 KCNQ1P51787 676 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 ERICH5Q6P6B1 374 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 OR4A15Q8NGL6 344 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF395Q9H8N7 513 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 WASF2Q9Y6W5 498 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 AHCYL1O43865 530 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 CLTBP09497 229 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 SMIM11AP58511 58 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 KREMEN2Q8NCW0 462 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 FADS3Q9Y5Q0 445 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 TTC24A2A3L6 582 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 MYL12AP19105 171 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 AOC1P19801 751 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 DCTN2Q13561 401 aaKnown RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 GPR33Q49SQ1 333 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 PHYKPLQ8IUZ5 450 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 RPL10LQ96L21 214 aaKnown RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 SIRPGQ9P1W8 387 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 AK5Q9Y6K8 562 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 ELOVL7A1L3X0 281 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF623O75123 536 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 BEST1O76090 585 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 HAPLN1P10915 354 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 SLC6A2P23975 617 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 SLC26A3P40879 764 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 MAPK10P53779 464 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 C21orf59P57076 290 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 NAE1Q13564 534 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 CBX2Q14781 532 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 AGMOQ6ZNB7 445 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 C17orf64Q86WR6 236 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 DEPDC4Q8N2C3 294 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 DGCR14Q96DF8 476 aaKnown RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 EPB41L4BQ9H329 900 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 RSL24D1Q9UHA3 163 aaKnown RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 TRIM24O15164 1050 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 LYNP07948 512 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 PEX2P28328 305 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 CENPAP49450 140 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 PCLAFQ15004 111 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 ARMCX4Q5H9R4 360 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF697Q5TEC3 545 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 BEND7Q8N7W2 519 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 LEMD2Q8NC56 503 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 PHF10Q8WUB8 498 aaKnown RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 SMG7Q92540 1137 aaKnown RBP16.56■□□□□ 0.24
PHRF1-201ENST00000264555 ATG10Q9H0Y0 220 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms