RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PAQR9Q6ZVX9 377 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 EID3Q8N140 333 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 ISG20Q96AZ6 181 aaKnown RBP12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 ZNF599Q96NL3 588 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 CCDC115Q96NT0 180 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 TRIM62Q9BVG3 475 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 TRIM8Q9BZR9 551 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 SCUBE2Q9NQ36 999 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 SCN3BQ9NY72 215 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 AP3M1Q9Y2T2 418 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
CHMP2B-201ENST00000263780 TAF4O00268 1085 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 ARNTLO00327 626 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 SLC16A6O15403 523 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 KRT75O95678 551 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 LGALS2P05162 132 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 UROSP10746 265 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 TCF3P15923 654 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 FDXRP22570 491 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 IL12AP29459 219 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 ISL1P61371 349 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 UFM1P61960 85 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 PPP2R2BQ00005 443 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 MVKQ03426 396 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 KCNAB2Q13303 367 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 TIGD2Q4W5G0 525 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 NOL9Q5SY16 702 aaKnown RBP12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 ATAD3BQ5T9A4 648 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 STAG3L4Q8TBR4 150 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 DYNC2LI1Q8TCX1 351 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 FAR1Q8WVX9 515 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 COPS5Q92905 334 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 RPL10LQ96L21 214 aaKnown RBP12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 SLC25A51Q9H1U9 297 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 CXCL16Q9H2A7 254 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 VPS51Q9UID3 782 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 POU2F3Q9UKI9 436 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 RBMX2Q9Y388 322 aaKnown RBP12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 SNX10Q9Y5X0 201 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 ZSWIM8A7E2V4 1837 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 COL4A5P29400 1685 aa12.27□□□□□ -0.44
CHMP2B-201ENST00000263780 EVPLQ92817 2033 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SNPHO15079 494 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 RECQL4O94761 1208 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SIX3O95343 332 aaPredicted RBP12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 BMP1P13497 986 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SOX11P35716 441 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 EMX1Q04741 257 aaPredicted RBP12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 CTU2Q2VPK5 515 aaKnown RBP12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 ADPRMQ3LIE5 342 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SLX4IPQ5VYV7 408 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 NECAB2Q7Z6G3 386 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 OSTM1Q86WC4 334 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 ZFAND4Q86XD8 727 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 ARHGAP12Q8IWW6 846 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 FBXO16Q8IX29 292 aaPredicted RBP12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 FBXO39Q8N4B4 442 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 DTWD1Q8N5C7 304 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 OR8J3Q8NGG0 315 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 OR5K1Q8NHB7 308 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SGCDQ92629 289 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 YIPF6Q96EC8 236 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 AMBRA1Q9C0C7 1298 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SYTL2Q9HCH5 934 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 INTS7Q9NVH2 962 aaKnown RBP12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 POLR3BQ9NW08 1133 aaPredicted RBP12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 HSPE1-MOB4S4R3N1 261 aa12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 ZFC3H1O60293 1989 aaKnown RBP12.27□□□□□ -0.45
CHMP2B-201ENST00000263780 SMIM28A0A1B0GU29 152 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 FAM92AA1XBS5 289 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 RGS13O14921 159 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 RFPL2O75678 378 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 UPK1BO75841 260 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 HLA-DQB2P05538 268 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 HOXA11P31270 313 aaPredicted RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 ALDH7A1P49419 539 aaKnown RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 SUOXP51687 545 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 CXCR4P61073 352 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 TUBA1BP68363 451 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 ARHGAP36Q6ZRI8 547 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 TUBA1AQ71U36 451 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 KDELC2Q7Z4H8 507 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 DSG4Q86SJ6 1040 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 PLD3Q8IV08 490 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 MCOLN3Q8TDD5 553 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 KCNA7Q96RP8 456 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 NDEL1Q9GZM8 345 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 HOXD1Q9GZZ0 328 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 ATXN3LQ9H3M9 355 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 PIF1Q9H611 641 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 CCNB1IP1Q9NPC3 277 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 PAK1IP1Q9NWT1 392 aaPredicted RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 SMPD4Q9NXE4 827 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms