RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 MYRFLQ96LU7 910 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 MUS81Q96NY9 551 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 PPP1R2P1Q96PQ5 205 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 GPATCH1Q9BRR8 931 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 TRIM62Q9BVG3 475 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 RPF2Q9H7B2 306 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 TAS2R13Q9NYV9 303 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 TBKBP1A7MCY6 615 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 IQCF5A8MTL0 148 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 GPR39O43194 453 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 BMP10O95393 424 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 ITGB6P18564 788 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 RPL9P32969 192 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 CCT8P50990 548 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 PIGFQ07326 219 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 BNIP2Q12982 314 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 SGO1Q5FBB7 561 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 GLYATQ6IB77 296 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 NANOGP8Q6NSW7 305 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 FBXO46Q6PJ61 603 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 MINDY1Q8N5J2 469 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 FBXO30Q8TB52 745 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 BIRC7Q96CA5 298 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 FAM193BQ96PV7 902 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 UHRF1Q96T88 793 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 TBCDQ9BTW9 1192 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 NPLQ9BXD5 320 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 CCDC90BQ9GZT6 254 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 NANOGQ9H9S0 305 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 PRM3Q9NNZ6 103 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 EIF2B4Q9UI10 523 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 ZMYM5Q9UJ78 669 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 A0A0D9SEW6 157 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 A0A0U1RQF3 1178 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 C1orf232A0A0U1RR37 186 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 GNGT2O14610 69 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 OR1I1O60431 355 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 NIPSNAP2O75323 286 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 C1RP00736 705 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 IL1RL1Q01638 556 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 NRG1Q02297 640 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 RAD51Q06609 339 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 BFSP2Q13515 415 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 PYCR3Q53H96 274 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 CLLU1OSQ5K130 101 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 PRMT9Q6P2P2 845 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 TRAF7Q6Q0C0 670 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 TAS2R42Q7RTR8 314 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 PATL1Q86TB9 770 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 KIAA2013Q8IYS2 634 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 ARRDC2Q8TBH0 407 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 FIG4Q92562 907 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.34□□□□□ -0.112e-7■■■■■ 62.8
SFSWAP-201ENST00000261674 TMEM125Q96AQ2 219 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 CDKN2AIPNLQ96HQ2 116 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 NSMCE2Q96MF7 247 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 ARNT2Q9HBZ2 717 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 SDR39U1Q9NRG7 319 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 OGDHLQ9ULD0 1010 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 RSL1D1O76021 490 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 FDXRP22570 491 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 MYF6P23409 242 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 POLR2JP52435 117 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 GALNT1Q10472 559 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 SLC36A3Q495N2 470 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 ZRANB3Q5FWF4 1079 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 LYSMD3Q7Z3D4 306 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 SYVN1Q86TM6 617 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 SIDT2Q8NBJ9 832 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 OR7D4Q8NG98 312 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 FNDC8Q8TC99 324 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 SGCDQ92629 289 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 TSPAN18Q96SJ8 248 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 ATOH8Q96SQ7 321 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 DGCR6LQ9BY27 220 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 FANCEQ9HB96 536 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 IFT80Q9P2H3 777 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 GIT1Q9Y2X7 761 aa14.34□□□□□ -0.11
SFSWAP-201ENST00000261674 ZNF236Q9UL36 1845 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 A0A1W2PP18 115 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 PTGES3LE9PB15 166 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 H3BMQ9 156 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 MAN1A2O60476 641 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 GMNNO75496 209 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 SERPINF2P08697 491 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 ATXN1LP0C7T5 689 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 CAPGP40121 348 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 LAPTM5Q13571 262 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 GLB1LQ6UWU2 654 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 HACD2Q6Y1H2 254 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 OR52B6Q8NGF0 335 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 FBXO32Q969P5 355 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 MYEOVQ96EZ4 313 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 FEM1CQ96JP0 617 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 COG8Q96MW5 612 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 SLC30A3Q99726 388 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 TBC1D23Q9NUY8 699 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 EXD2Q9NVH0 621 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms