RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZNF462Q96JM2 2506 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CCDC85CA6NKD9 419 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 C9JVG2 144 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 OPA1O60313 960 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 PSKH1P11801 424 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 ACPPP15309 386 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 ERN2Q76MJ5 926 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SETD3Q86TU7 594 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TGS1Q96RS0 853 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TASP1Q9H6P5 420 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 UCKL1Q9NWZ5 548 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 PSD3Q9NYI0 1048 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 PMPCBO75439 489 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TIAF1O95411 115 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CD6P30203 668 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 BST1Q10588 318 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 IFRD2Q12894 506 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 RFTN2Q52LD8 501 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM180BQ6P0A1 224 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 FRMD7Q6ZUT3 714 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF227Q86WZ6 799 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TTC39CQ8N584 583 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CDK15Q96Q40 435 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TEX101Q9BY14 249 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 DUSP15Q9H1R2 295 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SYNCQ9H7C4 482 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 FGF22Q9HCT0 170 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM60AQ9NP50 221 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SPHK1Q9NYA1 384 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CD84Q9UIB8 345 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 KCNE5Q9UJ90 142 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 ERVW-1Q9UQF0 538 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 DLGAP4Q9Y2H0 992 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC30A1Q9Y6M5 507 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CBX4O00257 560 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 MATN2O00339 956 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 KLF11O14901 512 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SLCO2B1O94956 709 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TP53P04637 393 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SPINT3P49223 89 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 OVGP1Q12889 678 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 NFATC2Q13469 925 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 GPM6BQ13491 265 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 IL31Q6EBC2 164 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 DUS1LQ6P1R4 473 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TSSK4Q6SA08 328 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 MARCH9Q86YJ5 346 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SCN4BQ8IWT1 228 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 ARFGAP2Q8N6H7 521 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SGCDQ92629 289 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 FICDQ9BVA6 458 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SSUH2Q9Y2M2 353 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 A8MT66 165 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 TBL1XO60907 577 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 EPOP01588 193 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CAPN1P07384 714 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 IVLP07476 585 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PAX3P23760 479 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PCSK1P29120 753 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 LMAN1P49257 510 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 ADPRHP54922 357 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CDH4P55283 916 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CLDN6P56747 220 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 NCALDP61601 193 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PDIA2Q13087 525 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PDK4Q16654 411 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF852Q6ZMS4 543 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 RAB3IL1Q8TBN0 382 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PDXPQ96GD0 296 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 MRM3Q9HC36 420 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 OXSMQ9NWU1 459 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CIDEBQ9UHD4 219 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PCTPQ9UKL6 214 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 A0A1B0GVM2 712 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 SMIM10L1P0DMW3 83 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 LAG3P18627 525 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CAPN3P20807 821 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 GPX3P22352 226 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 ATP5C1P36542 298 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 MDH1P40925 334 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CDKN2CP42773 168 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 STARD6P59095 220 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM91A1Q658Y4 838 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 DESI1Q6ICB0 168 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 NHLRC1Q6VVB1 395 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 SYCE1Q8N0S2 351 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 OR4K2Q8NGD2 314 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 OR4D11Q8NGI4 311 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 SUN3Q8TAQ9 357 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PROKR1Q8TCW9 393 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PGBD4Q96DM1 585 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 SMIM10Q96HG1 83 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 TUBB6Q9BUF5 446 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 FRMD8Q9BZ67 464 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 ARL8BQ9NVJ2 186 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 VNN3Q9NY84 501 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 FEZ2Q9UHY8 353 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 NOVA2Q9UNW9 492 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PTGER3P43115 390 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PAOXQ6QHF9 649 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms