RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 NDUFAF6Q330K2 333 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 CDCA2Q69YH5 1023 aaPredicted RBP18.81■□□□□ 0.6
PTPRE-201ENST00000254667 CIR1Q86X95 450 aaPredicted RBP18.81■□□□□ 0.6
PTPRE-201ENST00000254667 CROCCP3Q8IVE0 287 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 ADCY4Q8NFM4 1077 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 BTBD9Q96Q07 612 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 NMUR2Q9GZQ4 415 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 MAT2BQ9NZL9 334 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 SUCOQ9UBS9 1254 aaKnown RBP18.81■□□□□ 0.6
PTPRE-201ENST00000254667 SRRDQ9UH36 339 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 UGT2B17O75795 530 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 RPL17P18621 184 aaKnown RBP18.81■□□□□ 0.6
PTPRE-201ENST00000254667 CCL14Q16627 93 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 AMIGO2Q86SJ2 522 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 CFAP206Q8IYR0 622 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 PIK3C3Q8NEB9 887 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 ZNF516Q92618 1163 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 FKBPLQ9UIM3 349 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 WBP4O75554 376 aaKnown RBP18.81■□□□□ 0.6
PTPRE-201ENST00000254667 ZNF132P52740 706 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 PQLC1Q8N2U9 271 aa18.81■□□□□ 0.6
PTPRE-201ENST00000254667 PGAM4Q8N0Y7 254 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 WDR60Q8WVS4 1066 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 ZNF514Q96K75 400 aaPredicted RBP18.8■□□□□ 0.6
PTPRE-201ENST00000254667 ABCG4Q9H172 646 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 ZNF624Q9P2J8 865 aaPredicted RBP18.8■□□□□ 0.6
PTPRE-201ENST00000254667 CNTN6Q9UQ52 1028 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 G3V2T6 193 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 ASNA1O43681 348 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 HSPA7P48741 367 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 IL23RQ5VWK5 629 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 HERVK_113Q902F9 699 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 GULP1Q9UBP9 304 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 SNX10Q9Y5X0 201 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 ANXA4P09525 319 aaPredicted RBP18.8■□□□□ 0.6
PTPRE-201ENST00000254667 KCNE1P15382 129 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 WASP42768 502 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 LDB1Q86U70 411 aaPredicted RBP18.8■□□□□ 0.6
PTPRE-201ENST00000254667 PTGFRNQ9P2B2 879 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 N6AMT1Q9Y5N5 214 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 OR2AG2A6NM03 316 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 GSC2O15499 205 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 DDX6P26196 483 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPRE-201ENST00000254667 CCNFP41002 786 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 CYP4F2P78329 520 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 C2orf80Q0P641 193 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 GRB14Q14449 540 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 KLHL32Q96NJ5 620 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 WRAP53Q9BUR4 548 aaKnown RBP18.8■□□□□ 0.6
PTPRE-201ENST00000254667 ABCG8Q9H221 673 aa18.8■□□□□ 0.6
PTPRE-201ENST00000254667 SIN3BO75182 1162 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 UGT2B11O75310 529 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 GCNT6Q5T4J0 391 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 GLYATQ6IB77 296 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ING5Q8WYH8 240 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 EXO5Q9H790 373 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 PEAK1Q9H792 1746 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ABHD14A-ACY1A0A1B0GW23 586 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 FPGTO14772 594 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 UGT1A5P35504 534 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ATP12AP54707 1039 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ATP1A4Q13733 1029 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 MZT2BQ6NZ67 158 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 CNKSR3Q6P9H4 555 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 HIPK1Q86Z02 1210 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 RAD51AP1Q96B01 352 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 CLK4Q9HAZ1 481 aaKnown RBP18.79■□□□□ 0.6
PTPRE-201ENST00000254667 MTRRQ9UBK8 725 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 HEBP2Q9Y5Z4 205 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 TM7SF2O76062 418 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 NR2F6P10588 404 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 CDK9P50750 372 aaKnown RBP18.79■□□□□ 0.6
PTPRE-201ENST00000254667 EML3Q32P44 896 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 GPR33Q49SQ1 333 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 GJD3Q8N144 294 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 OR2T34Q8NGX1 318 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 OR2T3Q8NH03 318 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 CLHC1Q8NHS4 586 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ATG10Q9H0Y0 220 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 CLEC4MQ9H2X3 399 aaPredicted RBP18.79■□□□□ 0.6
PTPRE-201ENST00000254667 SEC14L3Q9UDX4 400 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 TIMM22Q9Y584 194 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ECDO95905 644 aaPredicted RBP18.79■□□□□ 0.6
PTPRE-201ENST00000254667 CA9Q16790 459 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ASTE1Q2TB18 679 aaPredicted RBP18.79■□□□□ 0.6
PTPRE-201ENST00000254667 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.79■□□□□ 0.6
PTPRE-201ENST00000254667 GSTCDQ8NEC7 633 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 CMASQ8NFW8 434 aaPredicted RBP18.79■□□□□ 0.6
PTPRE-201ENST00000254667 C11orf49Q9H6J7 331 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 AP4B1Q9Y6B7 739 aa18.79■□□□□ 0.6
PTPRE-201ENST00000254667 ILVBLA1L0T0 632 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 ZNF37AP17032 561 aaPredicted RBP18.78■□□□□ 0.6
PTPRE-201ENST00000254667 CARD16Q5EG05 197 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 SCAMP5Q8TAC9 235 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 GDAP2Q9NXN4 497 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 FOLH1Q04609 750 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 FPGSQ05932 587 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 CHIT1Q13231 466 aa18.78■□□□□ 0.6
PTPRE-201ENST00000254667 ADGRF1Q5T601 910 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms