RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PCDHGB4Q9UN71 923 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 PCDHGB5Q9Y5G0 923 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 OR4F21O95013 312 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 PRAMEF1O95521 474 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 MAGEA8P43361 318 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 KANK2Q63ZY3 851 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 TPGS2Q68CL5 300 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 GAREM2Q75VX8 874 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 IFNEQ86WN2 208 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 HJURPQ8NCD3 748 aaPredicted RBP15.61■□□□□ 0.09
LRFN1-201ENST00000248668 TEX37Q96LM6 180 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 APOL5Q9BWW9 433 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 IL17CQ9P0M4 197 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 MICAL3Q7RTP6 2002 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 UNC80Q8N2C7 3258 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 A0A1W2PRU2 124 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 BAIAP3O94812 1187 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 HOXB8P17481 243 aaPredicted RBP15.6■□□□□ 0.09
LRFN1-201ENST00000248668 CREB5Q02930 508 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 FOLH1Q04609 750 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 MAP7D1Q3KQU3 841 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 PTRHD1Q6GMV3 140 aaKnown RBP15.6■□□□□ 0.09
LRFN1-201ENST00000248668 LKAAEAR1Q8TD35 194 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 VCX3BQ9H321 246 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 POPDC3Q9HBV1 291 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 PAK6Q9NQU5 681 aaPredicted RBP15.6■□□□□ 0.09
LRFN1-201ENST00000248668 MRPL17Q9NRX2 175 aaKnown RBP15.6■□□□□ 0.09
LRFN1-201ENST00000248668 RIMKLBQ9ULI2 386 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 UQCRBP14927 111 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 CSF2RAP15509 400 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 ITGB8P26012 769 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 CTSOP43234 321 aaPredicted RBP15.6■□□□□ 0.09
LRFN1-201ENST00000248668 PIK3CGP48736 1102 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 XIAPP98170 497 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 PLIN5Q00G26 463 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 GK3PQ14409 553 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 NRF1Q16656 503 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 FRA10AC1Q70Z53 315 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 RBM12BQ8IXT5 1001 aaKnown RBP15.6■□□□□ 0.09
LRFN1-201ENST00000248668 NKAPQ8N5F7 415 aaKnown RBP15.6■□□□□ 0.09
LRFN1-201ENST00000248668 C17orf80Q9BSJ5 609 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 CIPCQ9C0C6 399 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 PIF1Q9H611 641 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 ASB8Q9H765 288 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 ATXN10Q9UBB4 475 aa15.6■□□□□ 0.09
LRFN1-201ENST00000248668 GIPC1O14908 333 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 CD70P32970 193 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 ATP6V0D1P61421 351 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 ADGRE1Q14246 886 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 TRIM25Q14258 630 aaKnown RBP15.59■□□□□ 0.09
LRFN1-201ENST00000248668 AMIGO2Q86SJ2 522 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 TSPAN33Q86UF1 283 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 SERPINA9Q86WD7 417 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 MIER2Q8N344 545 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 TOP1MTQ969P6 601 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 TCF12Q99081 682 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 IL21Q9HBE4 155 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 PRSS21Q9Y6M0 314 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 RANBP2P49792 3224 aaKnown RBP15.59■□□□□ 0.09
LRFN1-201ENST00000248668 ANAPC1Q9H1A4 1944 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 MYOCOSA0A1B0GUC4 107 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 ZNF839A8K0R7 811 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 SYCE1LA8MT33 242 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 ANGPT2O15123 496 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 GREM1O60565 184 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 HNRNPCP07910 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
LRFN1-201ENST00000248668 LBPP18428 481 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 TMED1Q13445 227 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 OTOP2Q7RTS6 562 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 LRTOMTQ8WZ04 291 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 RIMS3Q9UJD0 308 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 PCTPQ9UKL6 214 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 OR51B4Q9Y5P0 310 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 RAB33AQ14088 237 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 TGFBIQ15582 683 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 FUT11Q495W5 492 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 RARS2Q5T160 578 aaKnown RBP15.59■□□□□ 0.09
LRFN1-201ENST00000248668 OGFRL1Q5TC84 451 aaPredicted RBP15.59■□□□□ 0.09
LRFN1-201ENST00000248668 PHYKPLQ8IUZ5 450 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 TRMT2BQ96GJ1 504 aaKnown RBP15.59■□□□□ 0.09
LRFN1-201ENST00000248668 YME1L1Q96TA2 773 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 CFHR5Q9BXR6 569 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 SPG21Q9NZD8 308 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 EPS15L1Q9UBC2 864 aa15.59■□□□□ 0.09
LRFN1-201ENST00000248668 PFDN6O15212 129 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 TPST1O60507 370 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 PGLSO95336 258 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 CNPP09543 421 aaKnown RBP15.58■□□□□ 0.09
LRFN1-201ENST00000248668 GDF5P43026 501 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 BCL2L1Q07817 233 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 LMAN2Q12907 356 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 TLR1Q15399 786 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 CNKSR3Q6P9H4 555 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 CMTM8Q8IZV2 173 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 OR2T11Q8NH01 316 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 ASB9Q96DX5 294 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 ALG14Q96F25 216 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 CNBD2Q96M20 576 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 NOL11Q9H8H0 719 aaKnown RBP15.58■□□□□ 0.09
LRFN1-201ENST00000248668 ZFYVE1Q9HBF4 777 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms