RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 SGTBQ96EQ0 304 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 RANBP9Q96S59 729 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 RNF121Q9H920 327 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 SMURF1Q9HCE7 757 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 NCF1BA6NI72 391 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 NCF1CA8MVU1 366 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PAHP00439 452 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 GNAO1P09471 354 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 NCF1P14598 390 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 TPH1P17752 444 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PRKCHP24723 683 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 POLD2P49005 469 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PRMT2P55345 433 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 SNTA1Q13424 505 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PGBD2Q6P3X8 592 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 TFAP2DQ7Z6R9 452 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 CYP4Z2PQ8N1L4 340 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 L7N2F9 121 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 IFRD1O00458 451 aaPredicted RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 ZBTB14O43829 449 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 STX11O75558 287 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 GCATO75600 419 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 MAP2K3P46734 347 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF135P52742 658 aaPredicted RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 FADDQ13158 208 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 POU4F3Q15319 338 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 MAPKAPK3Q16644 382 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 INAVAQ3KP66 663 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 TRMT10BQ6PF06 316 aaKnown RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 PTCHD4Q6ZW05 846 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 NIM1KQ8IY84 436 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 TMEM102Q8N9M5 508 aaPredicted RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 S100PBPQ96BU1 408 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 FAM84AQ96KN4 292 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 TARS2Q9BW92 718 aaKnown RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 RANGRFQ9HD47 186 aaPredicted RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 TNFRSF10DQ9UBN6 386 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 MINPP1Q9UNW1 487 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 MYH6P13533 1939 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 LINC00032P0C843 101 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 CYP2A7P20853 494 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 LTKP29376 864 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 S100A12P80511 92 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 NFIAQ12857 509 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 HKDC1Q2TB90 917 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 FAM160B2Q86V87 743 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 SLITRK4Q8IW52 837 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 CHPFQ8IZ52 775 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 SLC9A6Q92581 669 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 LPIN3Q9BQK8 851 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 ARHGEF4Q9NR80 690 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 RGS18Q9NS28 235 aa12.77□□□□□ -0.36
VAMP4-201ENST00000236192 PPIEQ9UNP9 301 aaKnown RBP12.77□□□□□ -0.36
VAMP4-201ENST00000236192 A0A087WZ62 844 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 BHMG1C9JSJ3 638 aaPredicted RBP12.77□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF26P17031 533 aaPredicted RBP12.77□□□□□ -0.37
VAMP4-201ENST00000236192 RAB3AP20336 220 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 RPL10P27635 214 aaKnown RBP12.77□□□□□ -0.37
VAMP4-201ENST00000236192 ADORA2BP29275 332 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 MADCAM1Q13477 382 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 TMEM179Q6ZVK1 233 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 CYP4Z1Q86W10 505 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 PSTKQ8IV42 348 aaKnown RBP12.77□□□□□ -0.37
VAMP4-201ENST00000236192 LYSMD2Q8IV50 215 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 SLC38A6Q8IZM9 456 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 GDPD1Q8N9F7 314 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 C1GALT1C1Q96EU7 318 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 CEP41Q9BYV8 373 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 ALG9Q9H6U8 611 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 TCAF1Q9Y4C2 921 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 MEN1O00255 615 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 IPO13O94829 963 aaKnown RBP12.77□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF3P17036 446 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 PVALBP20472 110 aaPredicted RBP12.77□□□□□ -0.37
VAMP4-201ENST00000236192 CD247P20963 164 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 PWP1Q13610 501 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 MRNIPQ6NTE8 343 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 CDC73Q6P1J9 531 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 TXNDC11Q6PKC3 985 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 ASB15Q8WXK1 588 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 TADA1Q96BN2 335 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 RHOJQ9H4E5 214 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF112Q9UJU3 913 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 BTRCQ9Y297 605 aa12.77□□□□□ -0.37
VAMP4-201ENST00000236192 WRBO00258 174 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 SLC1A7O00341 560 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 PRMT5O14744 637 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-201ENST00000236192 YKT6O15498 198 aa12.76□□□□□ -0.37
VAMP4-201ENST00000236192 NPPAP01160 153 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms