RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CYTH4Q9UIA0 394 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 MKLN1Q9UL63 735 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ZNF705EA8MWA4 302 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 ZNF16P17020 682 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 RGS6P49758 472 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 PCDH1Q08174 1060 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 XKR6Q5GH73 641 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 RGMBQ6NW40 437 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SLC47A2Q86VL8 602 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CADM2Q8N3J6 435 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 TOR1AIP2Q8NFQ8 470 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SSX3Q99909 188 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 PRDM8Q9NQV8 689 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 KIF20BQ96Q89 1820 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SYNMO15061 1565 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 TECPR2O15040 1411 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 BCKDKO14874 412 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 TPST2O60704 377 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CLPXO76031 633 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 PON1P27169 355 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ADAM8P78325 824 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CSTF1Q05048 431 aaKnown RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 GRM2Q14416 872 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CRY1Q16526 586 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 KYAT3Q6YP21 454 aaKnown RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 OAFQ86UD1 273 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 NLGN4YQ8NFZ3 816 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 HM13Q8TCT9 377 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ERGIC2Q96RQ1 377 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 COMMD3Q9UBI1 195 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 PLAGL2Q9UPG8 496 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SPATA31A6Q5VVP1 1343 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 OR1I1O60431 355 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 WFS1O76024 890 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 QPCTQ16769 361 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 LACTB2Q53H82 288 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 NOMO2Q5JPE7 1267 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SLC22A16Q86VW1 577 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ZNF398Q8TD17 642 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 TNFRSF25Q93038 417 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 RIPOR3Q96MK2 946 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 IFT46Q9NQC8 304 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 KLQ9UEF7 1012 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 FBXW2Q9UKT8 454 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
MSH6-201ENST00000234420 RFX7Q2KHR2 1363 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 PPP1R3GB7ZBB8 358 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 TULP2O00295 520 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 RLN2P04090 185 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SLC10A7Q0GE19 358 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ZNF155Q12901 538 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 PFKFB4Q16877 469 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SCIMPQ6UWF3 145 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ASB18Q6ZVZ8 466 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ITCHQ96J02 903 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 PHB2Q99623 299 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 C7orf50Q9BRJ6 194 aaKnown RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 NR2E1Q9Y466 385 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 A0A1W2PQ67 120 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 SLC30A4O14863 429 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 ITGA2P17301 1181 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 F8A1P23610 371 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 GNALP38405 381 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 EIF1AXP47813 144 aaKnown RBP11.02□□□□□ -0.64
MSH6-201ENST00000234420 MYL6P60660 151 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 HTRA3P83110 453 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 CRY2Q49AN0 593 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 CERCAMQ5T4B2 595 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 OR10H5Q8NGA6 315 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 RXFP2Q8WXD0 754 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 OVCA2Q8WZ82 227 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 SLC22A4Q9H015 551 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 SLCO1B3Q9NPD5 702 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 TAS2R3Q9NYW6 316 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 GSG1L2A8MUP6 293 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 QSOX1O00391 747 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 VITQ6UXI7 678 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 USP50Q70EL3 339 aaPredicted RBP11.02□□□□□ -0.64
MSH6-201ENST00000234420 UBR7Q8N806 425 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 FAM13CQ8NE31 585 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 TSTD1Q8NFU3 115 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 FNDC11Q9BVV2 318 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 FTSJ1Q9UET6 329 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 RAB26Q9ULW5 256 aa11.02□□□□□ -0.64
MSH6-201ENST00000234420 LACTBL1A8MY62 500 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 M0QX08 132 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 PLD2O14939 933 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 UGT2B11O75310 529 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 SCGB1D2O95969 90 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 LBX1P52954 281 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 RAB5BP61020 215 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 BTBD16Q32M84 506 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ATAD3CQ5T2N8 411 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 GPSM1Q86YR5 675 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ANKRD6Q9Y2G4 727 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 A0A087X0B3 334 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 PLK4O00444 970 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ANGPTL1O95841 491 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms