RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 WFIKKN2Q8TEU8 576 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 OLFM1Q99784 485 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 NMUR2Q9GZQ4 415 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 TRPV5Q9NQA5 729 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 PNPOQ9NVS9 261 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 CPSF2Q9P2I0 782 aaKnown RBP10.58□□□□□ -0.72
CDCA3-201ENST00000229265 DHRS7Q9Y394 339 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 ZNF711Q9Y462 761 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 KCTD3Q9Y597 815 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 SPO11Q9Y5K1 396 aa10.58□□□□□ -0.72
CDCA3-201ENST00000229265 CEP250Q9BV73 2442 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 CAPN8A6NHC0 703 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 CHURC1-FNTBB4DL54 471 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 PRMT5O14744 637 aaPredicted RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 KERAO60938 352 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 VPS4BO75351 444 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 RHOBTB1O94844 696 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 PIGNO95427 931 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 CBSLP0DN79 551 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 KITP10721 976 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 SRCP12931 536 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 ZNF30P17039 623 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 MC4RP32245 332 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 CBSP35520 551 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 GCKP35557 465 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 ABL2P42684 1182 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 FNTBP49356 437 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 GALK1P51570 392 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 CDKN2DP55273 166 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 HERVK_113P63132 956 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 TIAL1Q01085 375 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 PEX6Q13608 980 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 HERC3Q15034 1050 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 ZNF678Q5SXM1 525 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 RBM20Q5T481 1227 aaKnown RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 BRAT1Q6PJG6 821 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 NAPRTQ6XQN6 538 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 RBFAQ8N0V3 343 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 LSMEM2Q8N112 164 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 ZNF781Q8N8C0 355 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 ZBTB44Q8NCP5 570 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 THOC1Q96FV9 657 aaKnown RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 MYO19Q96H55 970 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 NSMCE3Q96MG7 304 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 BIRC8Q96P09 236 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 PLEKHG4BQ96PX9 1271 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 MCCC1Q96RQ3 725 aaPredicted RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 ERVK-6Q9BXR3 956 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 OSBPL1AQ9BXW6 950 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 P2RY12Q9H244 342 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 DCLRE1BQ9H816 532 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 TCF7L2Q9NQB0 619 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 ARL8BQ9NVJ2 186 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 MARCH4Q9P2E8 410 aaPredicted RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 DKK3Q9UBP4 350 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 INTS6Q9UL03 887 aaKnown RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 SLC27A6Q9Y2P4 619 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 CRYL1Q9Y2S2 319 aa10.57□□□□□ -0.72
CDCA3-201ENST00000229265 TNPO3Q9Y5L0 923 aaKnown RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 MYO18AQ92614 2054 aaKnown RBP10.57□□□□□ -0.72
CDCA3-201ENST00000229265 CCDC78A2IDD5 438 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 A8MT66 165 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 B2RBV5 119 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 TK2O00142 265 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 KPNA5O15131 536 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 GRID2O43424 1007 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 ZNF821O75541 412 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 ATP6V1G2O95670 118 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 MLYCDO95822 493 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 TOP3BO95985 862 aaKnown RBP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 MT-CO1P00395 513 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 KRT16P08779 473 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 PABPC1P11940 636 aaKnown RBP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 POLR2EP19388 210 aaKnown RBP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 ITGALP20701 1170 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 GJA4P35212 333 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 RECQLP46063 649 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 RPS9P46781 194 aaKnown RBP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 RGS4P49798 205 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 ATP4BP51164 291 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 NUBP1P53384 320 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 INHBCP55103 352 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 KCNJ2P63252 427 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 SF3A3Q12874 501 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 RUNX3Q13761 415 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 PTPRNQ16849 979 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 PREPLQ4J6C6 727 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-201ENST00000229265 TMEM196Q5HYL7 178 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 DGKKQ5KSL6 1271 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 C6orf163Q5TEZ5 329 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 TMEM207Q6UWW9 146 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 LINGO4Q6UY18 593 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 ZNF852Q6ZMS4 543 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 FRMD7Q6ZUT3 714 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 USP45Q70EL2 814 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 LONP2Q86WA8 852 aa10.56□□□□□ -0.72
CDCA3-201ENST00000229265 TEX9Q8N6V9 391 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms