RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CNDP2Q96KP4 475 aaKnown RBP13.99□□□□□ -0.17
SF1-201ENST00000227503 SPATA17Q96L03 361 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 NSUN5Q96P11 429 aaKnown RBP13.99□□□□□ -0.17
SF1-201ENST00000227503 C17orf80Q9BSJ5 609 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 MED10Q9BTT4 135 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 CRTAC1Q9NQ79 661 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 IGSF5Q9NSI5 407 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 IL37Q9NZH6 218 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 PIP5K1BO14986 540 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 JCHAINP01591 159 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 PTPN2P17706 415 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 HRH2P25021 359 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 TUBA3CQ13748 450 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 RPS6KA2Q15349 733 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 INTS6LQ5JSJ4 861 aaKnown RBP13.99□□□□□ -0.17
SF1-201ENST00000227503 C6orf141Q5SZD1 244 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 PNPT1Q8TCS8 783 aaKnown RBP13.99□□□□□ -0.17
SF1-201ENST00000227503 DNAJB3Q8WWF6 145 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 MUL1Q969V5 352 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 ROPN1LQ96C74 230 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 DMRTB1Q96MA1 342 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 MRPL57Q9BQC6 102 aaKnown RBP13.99□□□□□ -0.17
SF1-201ENST00000227503 EMILIN2Q9BXX0 1053 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 GSTO2Q9H4Y5 243 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 IPPQ9Y573 584 aa13.99□□□□□ -0.17
SF1-201ENST00000227503 BRCA2P51587 3418 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 HOXC11O43248 304 aaPredicted RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 MTSS1O43312 755 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 SNX2O60749 519 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 HSD17B1P14061 328 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 ARNTP27540 789 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 CHRNA4P43681 627 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 TUFMP49411 452 aaKnown RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 SLC12A2P55011 1212 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 SKIV2LQ15477 1246 aaKnown RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 RFPL4BQ6ZWI9 263 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 TFAP2DQ7Z6R9 452 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 TTC30BQ8N4P2 665 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 OR6Q1Q8NGQ2 317 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 GTF3C2Q8WUA4 911 aaPredicted RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 FIG4Q92562 907 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 PGAP3Q96FM1 320 aaPredicted RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 TEKT5Q96M29 485 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 SMOQ99835 787 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 BTBD2Q9BX70 525 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 TMEM30AQ9NV96 361 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 PCDHA9Q9Y5H5 950 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 DNAJC15Q9Y5T4 150 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 SNX5Q9Y5X3 404 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 UPK1AO00322 258 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 DEAF1O75398 565 aaPredicted RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 RFPL2O75678 378 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 ALPLP05186 524 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 ALDH7A1P49419 539 aaKnown RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 SH3BP2P78314 561 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 EMX1Q04741 257 aaPredicted RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 STEAP3Q658P3 488 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 ZMIZ2Q8NF64 920 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 IPMKQ8NFU5 416 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 TRIB2Q92519 343 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 TUBGCP3Q96CW5 907 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 THG1LQ9NWX6 298 aaKnown RBP13.98□□□□□ -0.17
SF1-201ENST00000227503 MOSPD1Q9UJG1 213 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 FBXO10Q9UK96 956 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 U3KQV3 271 aa13.98□□□□□ -0.17
SF1-201ENST00000227503 ASPDHA6ND91 283 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 TTC34A8MYJ7 566 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 PTGESO14684 152 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 F2P00734 622 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 GPIP06744 558 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 PSMB9P28065 219 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 FMO3P31513 532 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 HADHAP40939 763 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 CASP3P42574 277 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 POLD2P49005 469 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 DAG1Q14118 895 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 NDUFA5Q16718 116 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 HIST2H2ACQ16777 129 aaPredicted RBP13.97□□□□□ -0.17
SF1-201ENST00000227503 TECRLQ5HYJ1 363 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 PIM3Q86V86 326 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 CCDC103Q8IW40 242 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 FRS2Q8WU20 508 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 ATL1Q8WXF7 558 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 NODALQ96S42 347 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 CDK5RAP1Q96SZ6 601 aaKnown RBP13.97□□□□□ -0.17
SF1-201ENST00000227503 KIFC1Q9BW19 673 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 CARS2Q9HA77 564 aaKnown RBP13.97□□□□□ -0.17
SF1-201ENST00000227503 HPS4Q9NQG7 708 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 DDIT4Q9NX09 232 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 ERVK-18Q9QC07 812 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 OAS3Q9Y6K5 1087 aaKnown RBP13.97□□□□□ -0.17
SF1-201ENST00000227503 CCRL2O00421 344 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 IDH3BO43837 385 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 CNTN5O94779 1100 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 USP17L7P0C7H9 530 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 HGFP14210 728 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 CDH17Q12864 832 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 BNIP2Q12982 314 aa13.97□□□□□ -0.17
SF1-201ENST00000227503 LAPTM4AQ15012 233 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms