RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GNA12Q03113 381 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 FAM45BPQ6NSW5 357 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 KLHL35Q6PF15 583 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 GPSM1Q86YR5 675 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 OR10A6Q8NH74 314 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 FAM45AQ8TCE6 357 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 MAELQ96JY0 434 aaKnown RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CLK4Q9HAZ1 481 aaKnown RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 SCUBE2Q9NQ36 999 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 SUCOQ9UBS9 1254 aaKnown RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 KLQ9UEF7 1012 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 PCDHB5Q9Y5E4 795 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 ATE1O95260 518 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 C1QCP02747 245 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 RPL9P32969 192 aaKnown RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 XIAPP98170 497 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 TIAL1Q01085 375 aaKnown RBP eCLIP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 FPGSQ05932 587 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 MERTKQ12866 999 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 SF1Q15637 639 aaKnown RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CLLU1OSQ5K130 101 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 SPOUT1Q5T280 376 aaKnown RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 GLYATQ6IB77 296 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CCDC81Q6ZN84 652 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 LSRQ86X29 649 aaPredicted RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CAMK1DQ8IU85 385 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CNTN4Q8IWV2 1026 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 KIAA2013Q8IYS2 634 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 KRTCAP2Q8N6L1 136 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 ARL10Q8N8L6 244 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 GAB3Q8WWW8 586 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CCDC126Q96EE4 140 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 MUS81Q96NY9 551 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 OSBPL11Q9BXB4 747 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 TMEM181Q9P2C4 612 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF225Q9UK10 706 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 NUMA1Q14980 2115 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 TET1Q8NFU7 2136 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 C1orf232A0A0U1RR37 186 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 FXYD1O00168 92 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 RPP40O75818 363 aaKnown RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 PENKP01210 267 aaPredicted RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 RHOQP17081 205 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 TACR2P21452 398 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 PRKCZQ05513 592 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CARTPTQ16568 116 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 RNF219Q5W0B1 726 aaPredicted RBP14.94□□□□□ -0.02
EFNB1-201ENST00000204961 NANOGP8Q6NSW7 305 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 MSANTD2Q6P1R3 559 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 SPESP1Q6UW49 350 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 TPGS1Q6ZTW0 290 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 TICAM1Q8IUC6 712 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 DHRSXQ8N5I4 330 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 LMNTD1Q8N9Z9 388 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 STAG3L4Q8TBR4 150 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 NANOGQ9H9S0 305 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CXorf21Q9HAI6 301 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 MIA3Q5JRA6 1907 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 H3BNH8 94 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 SLC7A4O43246 635 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 MTX2O75431 263 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 SLC22A3O75751 556 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 CHEK2O96017 543 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 HMOX2P30519 316 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 OXCT1P55809 520 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 GTF2H3Q13889 308 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 DGCR6Q14129 220 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 ARHGEF7Q14155 803 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 CST9Q5W186 159 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 PTRHD1Q6GMV3 140 aaKnown RBP14.93□□□□□ -0.02
EFNB1-201ENST00000204961 GABPB2Q8TAK5 448 aaPredicted RBP14.93□□□□□ -0.02
EFNB1-201ENST00000204961 ZFRQ96KR1 1074 aaKnown RBP14.93□□□□□ -0.02
EFNB1-201ENST00000204961 TNKS2Q9H2K2 1166 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 ZFYVE28Q9HCC9 887 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 MYO1GB0I1T2 1018 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 INSIG1O15503 277 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 DFNA5O60443 496 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 HOXD8P13378 290 aaPredicted RBP14.93□□□□□ -0.02
EFNB1-201ENST00000204961 HK3P52790 923 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 ATN1P54259 1190 aaPredicted RBP14.93□□□□□ -0.02
EFNB1-201ENST00000204961 RFTN2Q52LD8 501 aaPredicted RBP14.93□□□□□ -0.02
EFNB1-201ENST00000204961 MORN1Q5T089 497 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 KCTD8Q6ZWB6 473 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 BIRC7Q96CA5 298 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 MFSD1Q9H3U5 465 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 PNPLA3Q9NST1 481 aa14.93□□□□□ -0.02
EFNB1-201ENST00000204961 AP3B1O00203 1094 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 POLR2JP52435 117 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 NAA20P61599 178 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 RTP2Q5QGT7 225 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 LETMD1Q6P1Q0 360 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 DEFB128Q7Z7B8 93 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 SDCCAG3Q96C92 435 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 MAF1Q9H063 256 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 GID8Q9NWU2 228 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 NDUFA13Q9P0J0 144 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 CD300AQ9UGN4 299 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 TLR6Q9Y2C9 796 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 PKP3Q9Y446 797 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms