RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Sec63Q8VHE0 760 aaKnown RBP11.99□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Agap3Q8VHH5 910 aa11.99□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Mrps18aQ99N85 196 aa11.99□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Sike1Q9CPR7 207 aa11.99□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 ApmapQ9D7N9 415 aa11.99□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Tmem174Q9DCX7 243 aa11.99□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Tnrc6aQ3UHK8 1896 aaKnown RBP11.99□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Zfp352A2AML7 551 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Armc4B2RY50 1037 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Pcdh9F8VPK8 1237 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Ifi206G3UZV2 921 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Gm6121L7MUF1 212 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Xbp1O35426 267 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 NmbrO54799 390 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 PlauP06869 433 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Krt19P19001 403 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Lmnb2P21619 596 aaKnown RBP11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 PenkP22005 268 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Zfp42P22227 288 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Nap1l1P28656 391 aaKnown RBP11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 ApodP51910 189 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Ube2iP63280 158 aaKnown RBP11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Rpl22P67984 128 aaKnown RBP11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Sox4Q06831 440 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Lingo4Q149C3 593 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Hvcn1Q3U2S8 269 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Nat9Q3UG98 241 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Cyb5d1Q5NCY3 228 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Acbd5Q5XG73 508 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 ZpbpQ62522 350 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Prr18Q6PAN7 307 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 LnpkQ7TQ95 425 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Zswim6Q80TB7 1207 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Ip6k2Q80V72 448 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Arl5aQ80ZU0 179 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Vipas39Q8BGQ1 491 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 NapepldQ8BH82 396 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fbxo48Q8CAT8 161 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Lrp11Q8CB67 483 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Galnt13Q8CF93 556 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Vmn1r87Q8R255 295 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Olfr1Q8VGI1 314 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Cdc42ep1Q91W92 409 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Zfp65Q91W94 390 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Bag2Q91YN9 210 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Olfr114Q923Q8 312 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Atad3Q925I1 591 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Stx17Q9D0I4 301 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Cldn22Q9D7U6 220 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Gpr63Q9EQQ3 425 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Pkp3Q9QY23 797 aa11.98□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Ints1Q6P4S8 2195 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Tex13c2A0A0G2JGA3 530 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fbf1A2A870 1173 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Ccdc163A2AGD7 326 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 TprnA2AI08 749 aaKnown RBP11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Gm382B1AXN3 1250 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Gm3259D3YUK0 475 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Cdh19E9Q3A7 770 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Zfp395E9Q5N9 508 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Tsc22d2E9Q7M2 769 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Galnt9G3X942 604 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Gm21976J3QNN2 249 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 FaahO08914 579 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Snx12O70493 165 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fcgr3P08508 261 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Klk1b9P15949 261 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Wnt3aP27467 352 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Tlx1P43345 332 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Pms2P54279 859 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fbxo40P62932 710 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Nucb2P81117 420 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Il12rb2P97378 874 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Rtel1Q0VGM9 1203 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 InscQ3HNM7 579 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Dyrk2Q5U4C9 599 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 MarcoQ60754 518 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 StyxQ60969 223 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fam185aQ7TPD2 378 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Ccnt2Q7TQK0 723 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Avl9Q80U56 649 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 GgnQ80WJ1 673 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Tyw1Q8BJM7 721 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Dupd1Q8BK84 215 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Mrpl22Q8BU88 206 aaKnown RBP11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fsd1lQ8BYN5 507 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Arhgap25Q8BYW1 648 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fmo9Q8C116 539 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Mill1Q8HWE7 395 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Sash3Q8K352 380 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 TxlnbQ8VBT1 685 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Map3k21Q8VDG6 1002 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Depdc7Q91WS7 511 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Fkbp6Q91XW8 327 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Pcdhb13Q91Y06 796 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Acot13Q9CQR4 140 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Q9CWU4 180 aaKnown RBP11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 Tmem80Q9D3H0 123 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 4930524N10RikQ9D519 233 aa11.97□□□□□ -0.49
Ccdc28a-202ENSMUST00000080860 S100pbpQ9D5K4 396 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms