RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gadd45aP48316 165 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pi4k2aQ2TBE6 479 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Jak3Q62137 1100 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tor1aip2Q8BYU6 502 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gin1Q8K259 518 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pbdc1Q9D0B6 198 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 EbplQ9D0P0 206 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 4933436I01RikQ9D3T1 429 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 PrccQ9EQC8 491 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Chrna10B2RX82 447 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Vmn2r120E9PX34 856 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Nxpe4Q52KP5 543 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Hsd3b5Q61694 373 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cyp2r1Q6VVW9 501 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Wasf2Q8BH43 497 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Echs1Q8BH95 290 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Qsox1Q8BND5 748 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Celf3Q8CIN6 465 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Galk1Q9R0N0 392 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Fbxo47A2A6H3 451 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr1040A2ARY1 313 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Atpif1O35143 106 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Taar7dQ5QD10 358 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 4933430I17RikQ8BHW4 495 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm2022A0A1Y7VLT7 144 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm8356J3QPD3 205 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cd247P24161 164 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Hsd17b2P51658 381 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Usp45Q8K387 813 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 FlcnQ8QZS3 579 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Lrrc42Q8R2U7 421 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Nle1Q8VEJ4 485 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slco1a5Q91YY5 670 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cmc1Q9CPZ8 106 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Exosc1Q9DAA6 195 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Il18rapQ9Z2B1 614 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Serpina3jD3Z451 420 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 KlO35082 1014 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 FkbplO35450 347 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 GhrP16882 650 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cbx3P23198 183 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Nyap1Q6PFX7 833 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Asz1Q8VD46 475 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 VarsQ9Z1Q9 1263 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ern2Q9Z2E3 911 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm6526G3X9Q9 198 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ntf3P20181 258 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr1346Q8VGH6 313 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slc15a4Q91W98 574 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Hs3st1O35310 311 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Yap1P46938 488 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Laptm4bQ91XQ6 227 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Sntg2Q925E0 539 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Teddm3Q9CQH1 294 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tmem138Q9D6G5 162 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Dhx15O35286 795 aaKnown RBP16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr867Q7TRF3 331 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr20Q7TRX9 314 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ppm1lQ8BHN0 360 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Lurap1lQ8K2P1 221 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mospd1Q8VEL0 213 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tceal6Q9DB24 200 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cyp2d11P24457 504 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Syndig1lQ3USQ7 237 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Thnsl2Q80W22 483 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rgs8Q8BXT1 180 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Kctd5Q8VC57 234 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Commd4Q9CQ02 199 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pih1d1Q9CQJ2 290 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Wdr55Q9CX97 388 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 9230104L09RikQ9D264 133 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slc15a2Q9ES07 729 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 QrfprP83861 433 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Lrrc14bQ3UJB3 510 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 PrkciQ62074 595 aaKnown RBP16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tmem164Q6PHN7 296 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 CerkQ8K4Q7 531 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Bco2Q99NF1 532 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pak1ip1Q9DCE5 382 aaKnown RBP16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Taf8Q9EQH4 308 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 FechP22315 420 aaKnown RBP16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Zfp953Q3UPV7 304 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Arcn1Q5XJY5 511 aaKnown RBP16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 FaddQ61160 205 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Lin52Q8CD94 116 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Q9CPS8 106 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Hcar2Q9EP66 360 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mbd1Q9Z2E2 636 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pdia2D3Z6P0 527 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Aldh3b3J3QMK6 479 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tbx10Q810F8 385 aa16.47■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pabpc4lG5E8X2 370 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tuba1bP05213 451 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tuba1aP68369 451 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tuba1cP68373 449 aaKnown RBP16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Obox3Q3UT54 335 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ptp4a2O70274 167 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Itgb5O70309 798 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Alg11Q3TZM9 492 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rhobtb2Q91V93 728 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms