RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Trim39Q9ESN2 488 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 SvilQ8K4L3 2170 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr625-ps1A0A140T8L4 321 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 GzmkO35205 263 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cldn2O88552 230 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Apoa4P06728 395 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vps45P97390 570 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Coq7P97478 217 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 GaltQ03249 379 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pcgf5Q3UK78 256 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 SgtaQ8BJU0 315 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cnksr3Q8BMA3 555 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Kansl2Q8BQR4 486 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Syn3Q8JZP2 579 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr617Q8VGA1 318 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hkdc1Q91W97 915 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Klhl28Q9CR40 571 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cdkn2aipnlQ9D211 116 aaKnown RBP10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gpr45Q9EQQ4 373 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 AgkQ9ESW4 421 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Htr3bQ9JHJ5 437 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ak1Q9R0Y5 194 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cdh22Q9WTP5 813 aa10.8□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sppl2cA2A6C4 690 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pgbd1E9Q492 415 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Adh6aE9Q5Z6 375 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sult3a1O35403 293 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 H2-Eb1P04230 264 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 SqleP52019 572 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hk3Q3TRM8 922 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sorbs2Q3UTJ2 1180 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 PrkciQ62074 595 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nlrp9cQ66X01 1004 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 BegainQ68EF6 600 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rad54bQ6PFE3 886 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dna2Q6ZQJ5 1062 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nrde2Q80XC6 1172 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 IfneQ80ZF2 192 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 PigwQ8C398 503 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Samd3Q8C4H2 520 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vps37aQ8CHS8 397 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Adgrg2Q8CJ12 1009 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Eml3Q8VC03 897 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 NpntQ91V88 561 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Far1Q922J9 515 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ifi44lQ9BDB7 447 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Itgb3bpQ9CQ82 176 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 MispQ9D279 648 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Bcas2Q9D287 225 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Spata9Q9D9R3 252 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Akr1a1Q9JII6 325 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nufip1Q9QXX8 484 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Htra1Q9R118 480 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nup188Q6ZQH8 1759 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zfc3h1B2RT41 1992 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rpl9-ps6A0A140T8T4 192 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 L3mbtl1A2A5N8 826 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm3526E9PZM0 191 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn2r61L7N2B8 865 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc6a20bO88575 635 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cd2P08920 344 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ap1g1P22892 822 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rpl9P51410 192 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Eif2ak2Q03963 515 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Serpina3gQ5I2A0 440 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 CcncQ62447 283 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Crtc1Q68ED7 630 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Psapl1Q8C1C1 522 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zmiz2Q8CIE2 920 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Brd8Q8R3B7 951 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc6a20aQ8VDB9 592 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sh3d19Q91X43 789 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Themis3Q9CU24 569 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nif3l1Q9EQ80 376 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc25a13Q9QXX4 676 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 H2afyQ9QZQ8 372 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm4924A0A1B0GR71 966 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Akain1G3UWD5 69 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nsmce4aG3XA30 381 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Usp2O88623 613 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Lingo4Q149C3 593 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Kcnk9Q3LS21 402 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tmem199Q5SYH2 208 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Taf1cQ6PDZ2 836 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tas2r131Q7M708 310 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rsbn1Q80T69 795 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 AftphQ80WT5 931 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pgs1Q8BHF7 553 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Abi3Q8BYZ1 367 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam110bQ8C739 366 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Scamp1Q8K021 338 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mtrf1Q8K126 446 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 ZwilchQ8R060 589 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pycr2Q922Q4 320 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pmf1Q9CPV5 202 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam90a1bQ9D4F3 419 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Efcab9Q9DAM2 216 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ndufs3Q9DCT2 263 aaKnown RBP10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gipc2Q9Z2H7 314 aa10.79□□□□□ -0.68
Msh3-201ENSMUST00000022220 Neu1O35657 409 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms