RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Peli3Q8BXR6 445 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Aqp12Q8CHJ2 290 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Art3Q8R2G4 371 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ttc39cQ8VE09 580 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Fam227aQ9D3V8 625 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ttc25Q9D4B2 624 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Nacc2Q9DCM7 586 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Slc29a1Q9JIM1 460 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 CasrQ9QY96 1079 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Nrf1Q9WU00 503 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Btbd35f16A0A087WSN2 498 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tbc1d25A1A5B6 742 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm14401A2ARV7 303 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm4450E9Q007 373 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Il13ra1O09030 424 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 CenpaO35216 134 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ybx1P62960 322 aaKnown RBP20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Pld2P97813 933 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Hsd3b4Q61767 373 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Creb3Q61817 404 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Trim17Q7TPM3 477 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Mark4Q8CIP4 752 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Pcdha6Q91Y14 946 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ak5Q920P5 562 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Oas1cQ924S2 362 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Chrnb2Q9ERK7 501 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Grm3Q9QYS2 879 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Wdr49A0A0N4SUK7 710 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Olfr671A0A1B0GSN5 317 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 SpaarA0A1B0GSZ0 75 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm3636E9Q5P1 227 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Olfr603L7N1Y4 312 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Pik3cdO35904 1043 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Limk2O54785 638 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gja1P23242 382 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 PrkcgP63318 697 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Fgf13P70377 245 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 NxnP97346 435 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 DhpsQ3TXU5 369 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ccdc185Q3V118 621 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 HecaQ3V1N5 544 aaKnown RBP20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tnfaip2Q61333 691 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Nlrp9cQ66X01 1004 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Kctd12Q6WVG3 327 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Znf423Q80TS5 1292 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Actr5Q80US4 605 aaKnown RBP20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Noc4lQ8BHY2 516 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Slc5a9Q8VDT1 685 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Mat2bQ99LB6 334 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tex13bQ99MW5 186 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 CatsperzQ9CQP8 194 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Lrrc17Q9CXD9 443 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 DlstQ9D2G2 454 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ttyh1Q9D3A9 450 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Rgs1Q9JL25 209 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Klhdc7bA0A286YD60 1263 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Vmn2r54K7N649 806 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ptch2O35595 1182 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Per3O70361 1113 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Mxd1P50538 227 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Smpdl3bP58242 456 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 BadQ61337 204 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 MslnQ61468 625 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Dlx3Q64205 287 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Sarm1Q6PDS3 724 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Mrpl47Q8K2Y7 252 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Oas1dQ8VI95 361 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Bpifa3Q9D9J8 232 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Rnft1Q9DCN7 395 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 RhojQ9ER71 214 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Aldh1a3Q9JHW9 512 aa20.21■□□□□ 0.83
Trim47-201ENSMUST00000021120 Myo10F8VQB6 2062 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 TrioQ0KL02 3102 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Trbv4A0A075B5I2 113 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Igkv5-39A0A0G2JDV4 115 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 SmoktcrA2KF29 484 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Chrna4O70174 629 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 P01670 111 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 P01671 111 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 P01672 111 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 PgrQ00175 926 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Mc1rQ01727 315 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 ItkQ03526 625 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Lrrc8bQ5DU41 803 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Foxd4Q60688 444 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Sox11Q7M6Y2 395 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Adam29Q811Q4 763 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Sh3rf2Q8BZT2 735 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Irak4Q8R4K2 459 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Stx12Q9ER00 274 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Mmp19Q9JHI0 527 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 CtsjQ9R014 334 aa20.2■□□□□ 0.82
Trim47-201ENSMUST00000021120 Dhx35A2ACQ1 703 aaKnown RBP20.19■□□□□ 0.82
Trim47-201ENSMUST00000021120 Acnat1A2AKK5 416 aa20.19■□□□□ 0.82
Trim47-201ENSMUST00000021120 Htr4P97288 388 aa20.19■□□□□ 0.82
Trim47-201ENSMUST00000021120 Cog7Q3UM29 770 aa20.19■□□□□ 0.82
Trim47-201ENSMUST00000021120 Rbm44Q3V089 1013 aa20.19■□□□□ 0.82
Trim47-201ENSMUST00000021120 Dnajc15Q78YY6 149 aa20.19■□□□□ 0.82
Trim47-201ENSMUST00000021120 ClyblQ8R4N0 338 aa20.19■□□□□ 0.82
Trim47-201ENSMUST00000021120 Olfr1325Q8VF43 315 aa20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms