RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr1480A0A140LIR8 359 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pnldc1B2RXZ1 531 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Sgo2bJ3QMK1 1167 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gm13128L7MU96 475 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ndst2P52850 883 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 GemP55041 295 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Slc6a4Q60857 630 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 MslnQ61468 625 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gpr142Q7TQN9 365 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Epb41l5Q8BGS1 731 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 UstQ8BUB6 407 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 DrgxQ8BYH0 263 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cdhr5Q8VHF2 831 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 March2Q99M02 246 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Lrrc4Q99PH1 652 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Trim33Q99PP7 1142 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Snx2Q9CWK8 519 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pidd1Q9ERV7 915 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tmem131O70472 1877 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Itih4A6X935 942 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gbp11A9YVJ5 442 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Vmn2r17E9PYF5 849 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 H2-M9O19442 342 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cdh1P09803 884 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ccdc153P0C7Q1 202 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 PuraP42669 321 aaKnown RBP16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ufm1P61961 85 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pros1Q08761 675 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rab3ipQ68EF0 428 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Olfr813Q7TRH5 310 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Plac9Q8K262 108 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Themis3Q9CU24 569 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ndufaf7Q9CWG8 436 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Smok1Q9QYZ4 484 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Smok4aA0JLX3 433 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ssxb6A2BI74 170 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tmem245B1AZA5 876 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cilp2D3Z7H8 1162 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Krt83E9Q1Y9 479 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 FancfE9Q5Z5 343 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Prkag1O54950 330 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 GuloP58710 440 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Hoxb13P70321 286 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Hbq1bQ3U0A6 142 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Creb3Q61817 404 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Hs3st5Q8BSL4 346 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Taf10Q8K0H5 218 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Olfr589Q8VGV8 317 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Glod4Q9CPV4 298 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cnot11Q9CWN7 505 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ddi1Q9DAF3 408 aa16.08■□□□□ 0.17
Trim28-201ENSMUST00000005705 Fam131cA2ADB2 273 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Cylc2B1AWN8 422 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Adam19O35674 920 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Htr5bP31387 370 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gpx3P46412 226 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Dyrk2Q5U4C9 599 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Klhl5Q6PFE1 708 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Q80Y73 168 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Nipal1Q8BMW7 416 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Dpp9Q8BVG4 862 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gk5Q8BX05 534 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Adgrg3Q8R0T6 542 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Timd2Q8R183 305 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Abtb1Q99LJ2 478 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Fbxo32Q9CPU7 355 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Exoc2Q9D4H1 924 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Smg9Q9DB90 520 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Apbb2Q9DBR4 760 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Dhx34Q9DBV3 1145 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Isca2Q9DCB8 154 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Capn10Q9ESK3 666 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Keap1Q9Z2X8 624 aaKnown RBP16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Szt2A2A9C3 3431 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 HttP42859 3119 aa16.08■□□□□ 0.16
Trim28-201ENSMUST00000005705 Olfr1200A2ATJ4 336 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Lipo4D3Z608 396 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Ackr2O08707 378 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 PenkP22005 268 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Cyp2c37P56654 490 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Pitx1P70314 315 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Lrrc58Q3UGP9 366 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Afap1l2Q5DTU0 825 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Foxb2Q64733 428 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rps9Q6ZWN5 194 aaKnown RBP16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Far2Q7TNT2 515 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Fstl5Q8BFR2 847 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 ManbaQ8K2I4 879 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Nol6Q8R5K4 1152 aaKnown RBP16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Cyb5r1Q9DB73 305 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Vmn1r49Q9WUF1 310 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Ap1m2Q9WVP1 423 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gm21083A0A0G2JFD5 256 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Klhdc7bA0A286YD60 1263 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Vmn2r125D3Z3M1 369 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Olfr414E9Q5P8 317 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rundc3aO08576 446 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Apex1P28352 317 aaKnown RBP16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Eif2ak2Q03963 515 aaKnown RBP16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Krt2Q3TTY5 707 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms