RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Tmbim6Q9D2C7 237 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Fndc8Q9D2H8 321 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 H2bfmQ9DAB5 224 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Olfr703Q9EPF5 319 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gm5478D3Z6R0 159 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gm17019K7N6W5 255 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Neu1O35657 409 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 TpmtO55060 240 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Stmn3O70166 180 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 TktP40142 623 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Snx21Q3UR97 363 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 AftphQ80WT5 931 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rdh12Q8BYK4 316 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Dio3Q91ZI8 304 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tnfaip8Q921Z5 198 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Pycr2Q922Q4 320 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Glod4Q9CPV4 298 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ogfod2Q9CQ04 349 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Det1Q9D0A0 550 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 TrmuQ9DAT5 417 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Atp5oQ9DB20 213 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Stap1Q9JM90 297 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rai2Q9QVY8 529 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Smok1Q9QYZ4 484 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Slc23a1Q9Z2J0 605 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Adamtsl1Q8BLI0 1745 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vmn2r7E9PYL5 915 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 SmgcF6VRN1 385 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vmn2r3H3BJ88 915 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vmn2r6H3BK29 913 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 PrkcgP63318 697 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Traf6P70196 530 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Dusp2Q05922 318 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mup21Q80YX8 181 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Psmd11Q8BG32 422 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Smoc1Q8BLY1 463 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 PclafQ9CQX4 110 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tdp2Q9JJX7 370 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 HaspinQ9Z0R0 754 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Adh6aE9Q5Z6 375 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tmigd3G3X8R9 209 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cdh1P09803 884 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Nat1P50294 290 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ccr5P51682 354 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cpne9Q1RLL3 553 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Itga1Q3V3R4 1179 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cpa6Q5U901 438 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Slc6a3Q61327 619 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Abcg1Q64343 666 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Amigo1Q80ZD8 492 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cdc16Q8R349 620 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Nae1Q8VBW6 534 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ttc39cQ8VE09 580 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tmem86aQ9D8N3 241 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Efhd2Q9D8Y0 240 aaKnown RBP12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Sult2a7A0A1B0GRF0 313 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Olfr566A0A1B0GST0 319 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 A0A286YDU1 74 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Fam151bD3YUE4 279 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gm16427J3QN52 483 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Nol9Q3TZX8 714 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cfhr2Q4LDF6 332 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Med22Q62276 200 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tmem151bQ68FE7 561 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mppe1Q80XL7 396 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Svs2Q8BS30 375 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 SntnQ8C9X1 147 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Abcb8Q9CXJ4 717 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vnn3Q9QZ25 500 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cntnap5aQ0V8T9 1304 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gucy2dA0A0U1RPR8 1117 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Olfr625-ps1A0A140T8L4 321 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ptch2O35595 1182 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 BdnfP21237 249 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Lad1P57016 528 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Pld2P97813 933 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Znf513Q6PD29 541 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ubp1Q811S7 540 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 TiprlQ8BH58 271 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Nim1kQ8BHI9 436 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Lrrc66Q8K0B3 872 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ugt2b1Q8R084 529 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Olfr617Q8VGA1 318 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Znf24Q91VN1 368 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Slc13a3Q91Y63 600 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 GhdcQ99J23 532 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Sae1Q9R1T2 350 aa12.65□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Kctd17E0CYQ0 296 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vmn2r17E9PYF5 849 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rundc3aO08576 446 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Apoa1Q00623 264 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Zyg11bQ3UFS0 744 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Q3UK37 420 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tmem102Q3UPR7 509 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Stard3Q61542 446 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Naa50Q6PGB6 169 aaKnown RBP12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rnf38Q8BI21 518 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Piwil2Q8CDG1 971 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Eml3Q8VC03 897 aa12.64□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Cant1Q8VCF1 403 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms