RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	RAPGEF4	Q8WZA2	1011 aa		11.89	□□□□□ -0.51
SAMMSON-223	ENST00000641923	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
SAMMSON-223	ENST00000641923	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.89	□□□□□ -0.51
SAMMSON-223	ENST00000641923	SPATA31A5	Q5VU36	1347 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	SPATA31A7	Q8IWB4	1347 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	MAPK8IP3	Q9UPT6	1336 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	RGPD2	P0DJD1	1756 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	AMOT	Q4VCS5	1084 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	NBPF6	Q5VWK0	638 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	SULT6B1	Q6IMI4	303 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	BARGIN	Q6ZT62	677 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	TCP11L2	Q8N4U5	519 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	NBPF4	Q96M43	638 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	WNK3	Q9BYP7	1800 aa		11.88	□□□□□ -0.51
SAMMSON-223	ENST00000641923	SPATA31A1	Q5TZJ5	1347 aa		11.87	□□□□□ -0.51
SAMMSON-223	ENST00000641923	ATRN	O75882	1429 aa		11.87	□□□□□ -0.51
SAMMSON-223	ENST00000641923	TAT	P17735	454 aa	Predicted RBP	11.87	□□□□□ -0.51
SAMMSON-223	ENST00000641923	LARP1	Q6PKG0	1096 aa	Known RBP	11.87	□□□□□ -0.51
SAMMSON-223	ENST00000641923	GTF3C3	Q9Y5Q9	886 aa		11.87	□□□□□ -0.51
SAMMSON-223	ENST00000641923	IL2RB	P14784	551 aa		11.86	□□□□□ -0.51
SAMMSON-223	ENST00000641923	GAS2L2	Q8NHY3	880 aa		11.86	□□□□□ -0.51
SAMMSON-223	ENST00000641923	RUNDC1	Q96C34	613 aa		11.86	□□□□□ -0.51
SAMMSON-223	ENST00000641923	CCDC9	Q9Y3X0	531 aa	Known RBP	11.86	□□□□□ -0.51
SAMMSON-223	ENST00000641923	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.85	□□□□□ -0.51
SAMMSON-223	ENST00000641923	FAM9B	Q8IZU0	186 aa		11.85	□□□□□ -0.51
SAMMSON-223	ENST00000641923	GJD4	Q96KN9	370 aa	Predicted RBP	11.85	□□□□□ -0.51
SAMMSON-223	ENST00000641923	RSPH6A	Q9H0K4	717 aa		11.85	□□□□□ -0.51
SAMMSON-223	ENST00000641923	ADAMTS8	Q9UP79	889 aa		11.85	□□□□□ -0.51
SAMMSON-223	ENST00000641923	SPG7	Q9UQ90	795 aa		11.85	□□□□□ -0.51
SAMMSON-223	ENST00000641923	PKD1L3	Q7Z443	1732 aa		11.84	□□□□□ -0.51
SAMMSON-223	ENST00000641923	PRKAR2B	P31323	418 aa		11.84	□□□□□ -0.51
SAMMSON-223	ENST00000641923	LMOD3	Q0VAK6	560 aa		11.84	□□□□□ -0.51
SAMMSON-223	ENST00000641923	CCDC184	Q52MB2	194 aa		11.84	□□□□□ -0.51
SAMMSON-223	ENST00000641923	OVOS2	A0A0G2JMS6	1433 aa		11.84	□□□□□ -0.51
SAMMSON-223	ENST00000641923	HMOX1	P09601	288 aa		11.83	□□□□□ -0.52
SAMMSON-223	ENST00000641923	RBM6	P78332	1123 aa	Known RBP	11.83	□□□□□ -0.52
SAMMSON-223	ENST00000641923	QTRT2	Q9H974	415 aa	Known RBP	11.83	□□□□□ -0.52
SAMMSON-223	ENST00000641923	DISP2	A7MBM2	1401 aa		11.83	□□□□□ -0.52
SAMMSON-223	ENST00000641923	PCDH11X	Q9BZA7	1347 aa		11.83	□□□□□ -0.52
SAMMSON-223	ENST00000641923	PCDH11Y	Q9BZA8	1340 aa		11.83	□□□□□ -0.52
SAMMSON-223	ENST00000641923	HTATSF1	O43719	755 aa	Known RBP	11.82	□□□□□ -0.52
SAMMSON-223	ENST00000641923	HSP90AB1	P08238	724 aa	Known RBP	11.82	□□□□□ -0.52
SAMMSON-223	ENST00000641923	PLEKHF1	Q96S99	279 aa		11.82	□□□□□ -0.52
SAMMSON-223	ENST00000641923	GLI3	P10071	1580 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	TNS2	Q63HR2	1409 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	EXOC5	O00471	708 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	ONECUT3	O60422	494 aa	Predicted RBP	11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	C1orf141	Q5JVX7	400 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	USHBP1	Q8N6Y0	703 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	USP35	Q9P2H5	1018 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	THSD7A	Q9UPZ6	1657 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	MEGF6	O75095	1541 aa		11.81	□□□□□ -0.52
SAMMSON-223	ENST00000641923	RXRB	P28702	533 aa		11.8	□□□□□ -0.52
SAMMSON-223	ENST00000641923	CALD1	Q05682	793 aa	Known RBP	11.8	□□□□□ -0.52
SAMMSON-223	ENST00000641923	NFE2L2	Q16236	605 aa		11.8	□□□□□ -0.52
SAMMSON-223	ENST00000641923	DDB1	Q16531	1140 aa		11.8	□□□□□ -0.52
SAMMSON-223	ENST00000641923	AEBP1	Q8IUX7	1158 aa		11.8	□□□□□ -0.52
SAMMSON-223	ENST00000641923	ZCRB1	Q8TBF4	217 aa	Known RBP	11.8	□□□□□ -0.52
SAMMSON-223	ENST00000641923	CCDC27	Q2M243	656 aa		11.79	□□□□□ -0.52
SAMMSON-223	ENST00000641923	AKAP4	Q5JQC9	854 aa		11.79	□□□□□ -0.52
SAMMSON-223	ENST00000641923	POTEH	Q6S545	545 aa		11.79	□□□□□ -0.52
SAMMSON-223	ENST00000641923	IFNL2	Q8IZJ0	200 aa		11.79	□□□□□ -0.52
SAMMSON-223	ENST00000641923	RTF1	Q92541	710 aa	Known RBP	11.79	□□□□□ -0.52
SAMMSON-223	ENST00000641923	RBM42	Q9BTD8	480 aa	Known RBP	11.79	□□□□□ -0.52
SAMMSON-223	ENST00000641923	LRRC37A3	O60309	1634 aa		11.78	□□□□□ -0.52
SAMMSON-223	ENST00000641923	DLG5	Q8TDM6	1919 aa		11.78	□□□□□ -0.52
SAMMSON-223	ENST00000641923	MAP3K5	Q99683	1374 aa		11.78	□□□□□ -0.52
SAMMSON-223	ENST00000641923	GNAT3	A8MTJ3	354 aa		11.77	□□□□□ -0.53
SAMMSON-223	ENST00000641923	TMPO	P42166	694 aa	Known RBP	11.77	□□□□□ -0.53
SAMMSON-223	ENST00000641923	FAM98C	Q17RN3	349 aa	Known RBP	11.77	□□□□□ -0.53
SAMMSON-223	ENST00000641923	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.77	□□□□□ -0.53
SAMMSON-223	ENST00000641923		A0A0G2JS52	829 aa		11.76	□□□□□ -0.53
SAMMSON-223	ENST00000641923	APAF1	O14727	1248 aa		11.76	□□□□□ -0.53
SAMMSON-223	ENST00000641923	PDE3B	Q13370	1112 aa		11.76	□□□□□ -0.53
SAMMSON-223	ENST00000641923	MTHFSD	Q2M296	383 aa	Known RBP	11.76	□□□□□ -0.53
SAMMSON-223	ENST00000641923	CCDC146	Q8IYE0	955 aa		11.76	□□□□□ -0.53
SAMMSON-223	ENST00000641923	DCAF5	Q96JK2	942 aa		11.76	□□□□□ -0.53
SAMMSON-223	ENST00000641923	BCL9	O00512	1426 aa		11.76	□□□□□ -0.53
SAMMSON-223	ENST00000641923	SHANK3	Q9BYB0	1731 aa		11.75	□□□□□ -0.53
SAMMSON-223	ENST00000641923	VIRMA	Q69YN4	1812 aa	Known RBP	11.75	□□□□□ -0.53
SAMMSON-223	ENST00000641923	RIPK4	P57078	832 aa		11.75	□□□□□ -0.53
SAMMSON-223	ENST00000641923	NKX1-1	Q15270	411 aa	Predicted RBP	11.75	□□□□□ -0.53
SAMMSON-223	ENST00000641923	PHACTR3	Q96KR7	559 aa		11.75	□□□□□ -0.53
SAMMSON-223	ENST00000641923	SCN11A	Q9UI33	1791 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	PHKG2	P15735	406 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	WDR63	Q8IWG1	891 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	SEPT12	Q8IYM1	358 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	BABAM1	Q9NWV8	329 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	ZBED9	Q6R2W3	1325 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	ADAMTS7	Q9UKP4	1686 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	KAT6B	Q8WYB5	2073 aa		11.74	□□□□□ -0.53
SAMMSON-223	ENST00000641923	ERVV-2	B6SEH9	535 aa		11.73	□□□□□ -0.53
SAMMSON-223	ENST00000641923	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
SAMMSON-223	ENST00000641923	IL16	Q14005	1332 aa		11.73	□□□□□ -0.53
SAMMSON-223	ENST00000641923	RGS17	Q9UGC6	210 aa	Predicted RBP	11.73	□□□□□ -0.53
SAMMSON-223	ENST00000641923	CEMIP	Q8WUJ3	1361 aa		11.72	□□□□□ -0.53
SAMMSON-223	ENST00000641923	CYP27B1	O15528	508 aa		11.72	□□□□□ -0.53
SAMMSON-223	ENST00000641923	HMGB2	P26583	209 aa	Known RBP	11.72	□□□□□ -0.53
SAMMSON-223	ENST00000641923	KRT27	Q7Z3Y8	459 aa		11.72	□□□□□ -0.53
SAMMSON-223	ENST00000641923	TEF	Q10587	303 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms