RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 NCOA4Q13772 614 aa10.47□□□□□ -0.73
CASC19-261ENST00000641853 GMPR2Q9P2T1 348 aaKnown RBP10.47□□□□□ -0.73
CASC19-261ENST00000641853 RELBQ01201 579 aa10.47□□□□□ -0.73
CASC19-261ENST00000641853 C6orf118Q5T5N4 469 aa10.47□□□□□ -0.73
CASC19-261ENST00000641853 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
CASC19-261ENST00000641853 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
CASC19-261ENST00000641853 MAFBQ9Y5Q3 323 aaPredicted RBP10.47□□□□□ -0.73
CASC19-261ENST00000641853 USP17L3A6NCW0 530 aa10.46□□□□□ -0.74
CASC19-261ENST00000641853 USP17L4A6NCW7 530 aa10.46□□□□□ -0.74
CASC19-261ENST00000641853 USP4Q13107 963 aa10.46□□□□□ -0.74
CASC19-261ENST00000641853 USP17L2Q6R6M4 530 aa10.46□□□□□ -0.74
CASC19-261ENST00000641853 USP17L1Q7RTZ2 530 aa10.46□□□□□ -0.74
CASC19-261ENST00000641853 SUPT5HO00267 1087 aaKnown RBP10.45□□□□□ -0.74
CASC19-261ENST00000641853 PLEKHM2Q8IWE5 1019 aa10.45□□□□□ -0.74
CASC19-261ENST00000641853 TSEN34Q9BSV6 310 aaKnown RBP10.45□□□□□ -0.74
CASC19-261ENST00000641853 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
CASC19-261ENST00000641853 STAU1O95793 577 aaKnown RBP10.44□□□□□ -0.74
CASC19-261ENST00000641853 MYCP01106 439 aaPredicted RBP10.44□□□□□ -0.74
CASC19-261ENST00000641853 PTGIRP43119 386 aa10.44□□□□□ -0.74
CASC19-261ENST00000641853 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
CASC19-261ENST00000641853 BMP2P12643 396 aa10.44□□□□□ -0.74
CASC19-261ENST00000641853 ATP5J2-PTCD1G3V325 749 aa10.43□□□□□ -0.74
CASC19-261ENST00000641853 SPINT1O43278 529 aa10.43□□□□□ -0.74
CASC19-261ENST00000641853 EML3Q32P44 896 aa10.43□□□□□ -0.74
CASC19-261ENST00000641853 SCARF1Q14162 830 aa10.42□□□□□ -0.74
CASC19-261ENST00000641853 CYP2U1Q7Z449 544 aa10.42□□□□□ -0.74
CASC19-261ENST00000641853 PCDHGA11Q9Y5H2 935 aa10.42□□□□□ -0.74
CASC19-261ENST00000641853 LZTS3O60299 673 aaPredicted RBP10.41□□□□□ -0.74
CASC19-261ENST00000641853 UPP2O95045 317 aa10.41□□□□□ -0.74
CASC19-261ENST00000641853 LMOD1P29536 600 aaPredicted RBP10.41□□□□□ -0.74
CASC19-261ENST00000641853 INSM2Q96T92 566 aaPredicted RBP10.41□□□□□ -0.74
CASC19-261ENST00000641853 ESF1Q9H501 851 aaKnown RBP10.41□□□□□ -0.74
CASC19-261ENST00000641853 A0A1W2PRU2 124 aa10.4□□□□□ -0.74
CASC19-261ENST00000641853 SNRPBP14678 240 aaKnown RBP10.4□□□□□ -0.74
CASC19-261ENST00000641853 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.74
CASC19-261ENST00000641853 TRIM52Q96A61 297 aa10.4□□□□□ -0.74
CASC19-261ENST00000641853 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
CASC19-261ENST00000641853 ARHGEF10LQ9HCE6 1279 aa10.4□□□□□ -0.74
CASC19-261ENST00000641853 RAB6BQ9NRW1 208 aa10.4□□□□□ -0.74
CASC19-261ENST00000641853 CTSOP43234 321 aaPredicted RBP10.4□□□□□ -0.75
CASC19-261ENST00000641853 SIRT1Q96EB6 747 aa10.4□□□□□ -0.75
CASC19-261ENST00000641853 NOD1Q9Y239 953 aa10.4□□□□□ -0.75
CASC19-261ENST00000641853 CLDN10P78369 228 aa10.39□□□□□ -0.75
CASC19-261ENST00000641853 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
CASC19-261ENST00000641853 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
CASC19-261ENST00000641853 SCNN1DP51172 638 aa10.38□□□□□ -0.75
CASC19-261ENST00000641853 GTF2IP78347 998 aa10.38□□□□□ -0.75
CASC19-261ENST00000641853 KANK4Q5T7N3 995 aaPredicted RBP10.38□□□□□ -0.75
CASC19-261ENST00000641853 ETNK1Q9HBU6 452 aa10.38□□□□□ -0.75
CASC19-261ENST00000641853 KIAA1024Q9UPX6 916 aa10.38□□□□□ -0.75
CASC19-261ENST00000641853 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
CASC19-261ENST00000641853 GNRH1P01148 92 aa10.37□□□□□ -0.75
CASC19-261ENST00000641853 IL2RAP01589 272 aa10.37□□□□□ -0.75
CASC19-261ENST00000641853 RFX1P22670 979 aa10.37□□□□□ -0.75
CASC19-261ENST00000641853 CCDC97Q96F63 343 aaPredicted RBP10.37□□□□□ -0.75
CASC19-261ENST00000641853 SENP2Q9HC62 589 aa10.37□□□□□ -0.75
CASC19-261ENST00000641853 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
CASC19-261ENST00000641853 ZBTB7BO15156 539 aaPredicted RBP10.36□□□□□ -0.75
CASC19-261ENST00000641853 CLN3Q13286 438 aa10.36□□□□□ -0.75
CASC19-261ENST00000641853 FOXD4L5Q5VV16 416 aaPredicted RBP10.36□□□□□ -0.75
CASC19-261ENST00000641853 SERPINA10Q9UK55 444 aa10.36□□□□□ -0.75
CASC19-261ENST00000641853 MEN1O00255 615 aa10.36□□□□□ -0.75
CASC19-261ENST00000641853 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
CASC19-261ENST00000641853 TTLL8A6PVC2 850 aa10.35□□□□□ -0.75
CASC19-261ENST00000641853 ZNF787Q6DD87 383 aa10.35□□□□□ -0.75
CASC19-261ENST00000641853 OGFOD1Q8N543 542 aa10.35□□□□□ -0.75
CASC19-261ENST00000641853 KIFC2Q96AC6 838 aa10.35□□□□□ -0.75
CASC19-261ENST00000641853 POLMQ9NP87 494 aaPredicted RBP10.35□□□□□ -0.75
CASC19-261ENST00000641853 HRH3Q9Y5N1 445 aa10.35□□□□□ -0.75
CASC19-261ENST00000641853 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
CASC19-261ENST00000641853 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
CASC19-261ENST00000641853 CDCA8Q53HL2 280 aa10.34□□□□□ -0.75
CASC19-261ENST00000641853 CNKSR1Q969H4 720 aa10.34□□□□□ -0.75
CASC19-261ENST00000641853 FIGNL2A6NMB9 653 aa10.33□□□□□ -0.76
CASC19-261ENST00000641853 GDF10P55107 478 aa10.33□□□□□ -0.76
CASC19-261ENST00000641853 CRTC2Q53ET0 693 aaPredicted RBP10.33□□□□□ -0.76
CASC19-261ENST00000641853 TRIM50Q86XT4 487 aa10.33□□□□□ -0.76
CASC19-261ENST00000641853 RNF217Q8TC41 542 aa10.33□□□□□ -0.76
CASC19-261ENST00000641853 XAGE2Q96GT9 111 aa10.33□□□□□ -0.76
CASC19-261ENST00000641853 DKK1O94907 266 aa10.33□□□□□ -0.76
CASC19-261ENST00000641853 ESYT1Q9BSJ8 1104 aa10.33□□□□□ -0.76
CASC19-261ENST00000641853 DNAAF2Q9NVR5 837 aaKnown RBP10.33□□□□□ -0.76
CASC19-261ENST00000641853 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.32□□□□□ -0.76
CASC19-261ENST00000641853 INHAP05111 366 aa10.32□□□□□ -0.76
CASC19-261ENST00000641853 RASA1P20936 1047 aa10.32□□□□□ -0.76
CASC19-261ENST00000641853 RNF144AP50876 292 aaPredicted RBP10.32□□□□□ -0.76
CASC19-261ENST00000641853 PSME1Q06323 249 aa10.32□□□□□ -0.76
CASC19-261ENST00000641853 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
CASC19-261ENST00000641853 VRTNQ9H8Y1 702 aa10.32□□□□□ -0.76
CASC19-261ENST00000641853 TPCN2Q8NHX9 752 aa10.31□□□□□ -0.76
CASC19-261ENST00000641853 WASLO00401 505 aaPredicted RBP10.3□□□□□ -0.76
CASC19-261ENST00000641853 MAN1A2O60476 641 aa10.3□□□□□ -0.76
CASC19-261ENST00000641853 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
CASC19-261ENST00000641853 CENPCQ03188 943 aa10.3□□□□□ -0.76
CASC19-261ENST00000641853 ESCO1Q5FWF5 840 aa10.3□□□□□ -0.76
CASC19-261ENST00000641853 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
CASC19-261ENST00000641853 NLRP3Q96P20 1036 aa10.3□□□□□ -0.76
CASC19-261ENST00000641853 FHDC1Q9C0D6 1143 aaPredicted RBP10.3□□□□□ -0.76
CASC19-261ENST00000641853 PTK7Q13308 1070 aa10.29□□□□□ -0.76
CASC19-261ENST00000641853 CCDC102BQ68D86 513 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms