RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 VAMP4O75379 141 aa21.08■□□□□ 0.97
PHGDH-216ENST00000641375 HAP1P54257 671 aaPredicted RBP21.08■□□□□ 0.97
PHGDH-216ENST00000641375 CRB1P82279 1406 aa21.08■□□□□ 0.97
PHGDH-216ENST00000641375 CRYBG1Q9Y4K1 1723 aa21.07■□□□□ 0.96
PHGDH-216ENST00000641375 CAMTA1Q9Y6Y1 1673 aa21.07■□□□□ 0.96
PHGDH-216ENST00000641375 NCAPD2Q15021 1401 aa21.07■□□□□ 0.96
PHGDH-216ENST00000641375 IPO8O15397 1037 aaKnown RBP21.07■□□□□ 0.96
PHGDH-216ENST00000641375 TWISTNBQ3B726 338 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-216ENST00000641375 USHBP1Q8N6Y0 703 aa21.07■□□□□ 0.96
PHGDH-216ENST00000641375 ANKRD24Q8TF21 1146 aa21.07■□□□□ 0.96
PHGDH-216ENST00000641375 COG6Q9Y2V7 657 aa21.07■□□□□ 0.96
PHGDH-216ENST00000641375 RGPD5Q99666 1765 aa21.07■□□□□ 0.96
PHGDH-216ENST00000641375 ABCC6O95255 1503 aa21.06■□□□□ 0.96
PHGDH-216ENST00000641375 MAP3K5Q99683 1374 aa21.06■□□□□ 0.96
PHGDH-216ENST00000641375 ZC3H6P61129 1189 aaKnown RBP21.06■□□□□ 0.96
PHGDH-216ENST00000641375 FTSJ3Q8IY81 847 aaKnown RBP21.06■□□□□ 0.96
PHGDH-216ENST00000641375 LRRC37A3O60309 1634 aa21.06■□□□□ 0.96
PHGDH-216ENST00000641375 DZIP1LQ8IYY4 767 aaKnown RBP21.05■□□□□ 0.96
PHGDH-216ENST00000641375 SOS2Q07890 1332 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-216ENST00000641375 ATF7IPQ6VMQ6 1270 aa21.04■□□□□ 0.96
PHGDH-216ENST00000641375 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
PHGDH-216ENST00000641375 KIAA0232Q92628 1395 aa21.04■□□□□ 0.96
PHGDH-216ENST00000641375 TSPYL6Q8N831 410 aa21.04■□□□□ 0.96
PHGDH-216ENST00000641375 LRRC59Q96AG4 307 aaKnown RBP21.04■□□□□ 0.96
PHGDH-216ENST00000641375 ERBB3P21860 1342 aa21.03■□□□□ 0.96
PHGDH-216ENST00000641375 CLUAP1Q96AJ1 413 aa21.03■□□□□ 0.96
PHGDH-216ENST00000641375 NOB1Q9ULX3 412 aaKnown RBP21.03■□□□□ 0.96
PHGDH-216ENST00000641375 RLBP1P12271 317 aa21.03■□□□□ 0.96
PHGDH-216ENST00000641375 TRIM27P14373 513 aa21.03■□□□□ 0.96
PHGDH-216ENST00000641375 C8orf58Q8NAV2 365 aa21.03■□□□□ 0.96
PHGDH-216ENST00000641375 COL18A1P39060 1754 aa21.02■□□□□ 0.96
PHGDH-216ENST00000641375 CENPQQ7L2Z9 268 aaPredicted RBP21.02■□□□□ 0.96
PHGDH-216ENST00000641375 AMOTQ4VCS5 1084 aa21.02■□□□□ 0.95
PHGDH-216ENST00000641375 CPDO75976 1380 aa21.01■□□□□ 0.95
PHGDH-216ENST00000641375 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-216ENST00000641375 MVPQ14764 893 aaKnown RBP21.01■□□□□ 0.95
PHGDH-216ENST00000641375 FAM208AQ9UK61 1670 aaKnown RBP21.01■□□□□ 0.95
PHGDH-216ENST00000641375 KDM2BQ8NHM5 1336 aa21.01■□□□□ 0.95
PHGDH-216ENST00000641375 NHSL1Q5SYE7 1610 aa21.01■□□□□ 0.95
PHGDH-216ENST00000641375 PLEKHO1Q53GL0 409 aaPredicted RBP21■□□□□ 0.95
PHGDH-216ENST00000641375 ARHGAP45Q92619 1136 aa21■□□□□ 0.95
PHGDH-216ENST00000641375 LMO7Q8WWI1 1683 aa21■□□□□ 0.95
PHGDH-216ENST00000641375 CABLES1Q8TDN4 633 aa21■□□□□ 0.95
PHGDH-216ENST00000641375 BABAM1Q9NWV8 329 aa21■□□□□ 0.95
PHGDH-216ENST00000641375 TSPYL4Q9UJ04 414 aa21■□□□□ 0.95
PHGDH-216ENST00000641375 TNNQ9UQP3 1299 aa21■□□□□ 0.95
PHGDH-216ENST00000641375 PRKCSHP14314 528 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-216ENST00000641375 MRPL50Q8N5N7 158 aaKnown RBP20.99■□□□□ 0.95
PHGDH-216ENST00000641375 DDX19BQ9UMR2 479 aa20.97■□□□□ 0.95
PHGDH-216ENST00000641375 IL17REQ8NFR9 667 aa20.97■□□□□ 0.95
PHGDH-216ENST00000641375 AKAP4Q5JQC9 854 aa20.96■□□□□ 0.95
PHGDH-216ENST00000641375 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.95
PHGDH-216ENST00000641375 TAF7Q15545 349 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-216ENST00000641375 PLEKHG2Q9H7P9 1386 aa20.94■□□□□ 0.94
PHGDH-216ENST00000641375 ZNF530Q6P9A1 599 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-216ENST00000641375 MIS18AQ9NYP9 233 aa20.94■□□□□ 0.94
PHGDH-216ENST00000641375 ITPRIPQ8IWB1 547 aa20.93■□□□□ 0.94
PHGDH-216ENST00000641375 SOS1Q07889 1333 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-216ENST00000641375 C1orf141Q5JVX7 400 aa20.93■□□□□ 0.94
PHGDH-216ENST00000641375 NLRP2Q9NX02 1062 aa20.93■□□□□ 0.94
PHGDH-216ENST00000641375 ABCA3Q99758 1704 aa20.92■□□□□ 0.94
PHGDH-216ENST00000641375 VIRMAQ69YN4 1812 aaKnown RBP20.92■□□□□ 0.94
PHGDH-216ENST00000641375 OVOS2A0A0G2JMS6 1433 aa20.92■□□□□ 0.94
PHGDH-216ENST00000641375 TCERG1O14776 1098 aaKnown RBP20.92■□□□□ 0.94
PHGDH-216ENST00000641375 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
PHGDH-216ENST00000641375 CHRNA2Q15822 529 aa20.92■□□□□ 0.94
PHGDH-216ENST00000641375 KRT24Q2M2I5 525 aa20.92■□□□□ 0.94
PHGDH-216ENST00000641375 TMEM57Q8N5G2 664 aa20.92■□□□□ 0.94
PHGDH-216ENST00000641375 RAPGEF4Q8WZA2 1011 aa20.92■□□□□ 0.94
PHGDH-216ENST00000641375 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
PHGDH-216ENST00000641375 API5Q9BZZ5 524 aaKnown RBP20.91■□□□□ 0.94
PHGDH-216ENST00000641375 PRDM11Q9NQV5 511 aa20.89■□□□□ 0.94
PHGDH-216ENST00000641375 LTBP4Q8N2S1 1624 aa20.89■□□□□ 0.93
PHGDH-216ENST00000641375 ABCC4O15439 1325 aa20.88■□□□□ 0.93
PHGDH-216ENST00000641375 TATP17735 454 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-216ENST00000641375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.88■□□□□ 0.93
PHGDH-216ENST00000641375 IGHDP01880 384 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 TEFQ10587 303 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 LGR6Q9HBX8 967 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 RBM19Q9Y4C8 960 aaKnown RBP20.87■□□□□ 0.93
PHGDH-216ENST00000641375 PCDHB15Q9Y5E8 787 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 CACNA1FO60840 1977 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 PTPRCP08575 1304 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 ROBO1Q9Y6N7 1651 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
PHGDH-216ENST00000641375 RWDD1Q9H446 243 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-216ENST00000641375 RNMTO43148 476 aaKnown RBP20.86■□□□□ 0.93
PHGDH-216ENST00000641375 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
PHGDH-216ENST00000641375 ADAMTS7Q9UKP4 1686 aa20.85■□□□□ 0.93
PHGDH-216ENST00000641375 MPRIPQ6WCQ1 1025 aa20.85■□□□□ 0.93
PHGDH-216ENST00000641375 ZBTB40Q9NUA8 1239 aa20.85■□□□□ 0.93
PHGDH-216ENST00000641375 CCDC30Q5VVM6 783 aa20.84■□□□□ 0.93
PHGDH-216ENST00000641375 STK31Q9BXU1 1019 aa20.84■□□□□ 0.93
PHGDH-216ENST00000641375 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
PHGDH-216ENST00000641375 WDR17Q8IZU2 1322 aa20.84■□□□□ 0.93
PHGDH-216ENST00000641375 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
PHGDH-216ENST00000641375 MEGF6O75095 1541 aa20.83■□□□□ 0.93
PHGDH-216ENST00000641375 SLC4A2P04920 1241 aa20.83■□□□□ 0.93
PHGDH-216ENST00000641375 PKD1L3Q7Z443 1732 aa20.83■□□□□ 0.92
PHGDH-216ENST00000641375 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms