RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 NBPF4Q96M43 638 aa22.12■■□□□ 1.13
PHGDH-208ENST00000641023 ALS2Q96Q42 1657 aa22.12■■□□□ 1.13
PHGDH-208ENST00000641023 TRIM27P14373 513 aa22.11■■□□□ 1.13
PHGDH-208ENST00000641023 TNNQ9UQP3 1299 aa22.11■■□□□ 1.13
PHGDH-208ENST00000641023 GNAT3A8MTJ3 354 aa22.11■■□□□ 1.13
PHGDH-208ENST00000641023 ELL2O00472 640 aaPredicted RBP22.11■■□□□ 1.13
PHGDH-208ENST00000641023 XIRP1Q702N8 1843 aaKnown RBP22.11■■□□□ 1.13
PHGDH-208ENST00000641023 MVPQ14764 893 aaKnown RBP22.1■■□□□ 1.13
PHGDH-208ENST00000641023 USHBP1Q8N6Y0 703 aa22.1■■□□□ 1.13
PHGDH-208ENST00000641023 RBM19Q9Y4C8 960 aaKnown RBP22.1■■□□□ 1.13
PHGDH-208ENST00000641023 C8orf58Q8NAV2 365 aa22.1■■□□□ 1.13
PHGDH-208ENST00000641023 CRB1P82279 1406 aa22.1■■□□□ 1.13
PHGDH-208ENST00000641023 TNS3Q68CZ2 1445 aa22.08■■□□□ 1.13
PHGDH-208ENST00000641023 BRINP3Q76B58 766 aa22.08■■□□□ 1.12
PHGDH-208ENST00000641023 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
PHGDH-208ENST00000641023 ANKRD24Q8TF21 1146 aa22.07■■□□□ 1.12
PHGDH-208ENST00000641023 SLAIN2Q9P270 581 aa22.07■■□□□ 1.12
PHGDH-208ENST00000641023 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
PHGDH-208ENST00000641023 ZC3H6P61129 1189 aaKnown RBP22.07■■□□□ 1.12
PHGDH-208ENST00000641023 MRPL50Q8N5N7 158 aaKnown RBP22.07■■□□□ 1.12
PHGDH-208ENST00000641023 ARHGAP45Q92619 1136 aa22.07■■□□□ 1.12
PHGDH-208ENST00000641023 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
PHGDH-208ENST00000641023 SPATA31A3Q5VYP0 1347 aa22.06■■□□□ 1.12
PHGDH-208ENST00000641023 DDX19BQ9UMR2 479 aa22.06■■□□□ 1.12
PHGDH-208ENST00000641023 PXDNQ92626 1479 aa22.06■■□□□ 1.12
PHGDH-208ENST00000641023 MED1Q15648 1581 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-208ENST00000641023 LRRC59Q96AG4 307 aaKnown RBP22.05■■□□□ 1.12
PHGDH-208ENST00000641023 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
PHGDH-208ENST00000641023 AXIN2Q9Y2T1 843 aa22.05■■□□□ 1.12
PHGDH-208ENST00000641023 ITPRIPQ8IWB1 547 aa22.03■■□□□ 1.12
PHGDH-208ENST00000641023 AMOTQ4VCS5 1084 aa22.02■■□□□ 1.11
PHGDH-208ENST00000641023 PLEKHO1Q53GL0 409 aaPredicted RBP22.02■■□□□ 1.11
PHGDH-208ENST00000641023 ERBB3P21860 1342 aa22.01■■□□□ 1.11
PHGDH-208ENST00000641023 IL17REQ8NFR9 667 aa22.01■■□□□ 1.11
PHGDH-208ENST00000641023 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
PHGDH-208ENST00000641023 MIS18AQ9NYP9 233 aa22.01■■□□□ 1.11
PHGDH-208ENST00000641023 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
PHGDH-208ENST00000641023 TMEM57Q8N5G2 664 aa22■■□□□ 1.11
PHGDH-208ENST00000641023 IGHDP01880 384 aa22■■□□□ 1.11
PHGDH-208ENST00000641023 CABLES1Q8TDN4 633 aa21.99■■□□□ 1.11
PHGDH-208ENST00000641023 TAF7Q15545 349 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-208ENST00000641023 KRT24Q2M2I5 525 aa21.99■■□□□ 1.11
PHGDH-208ENST00000641023 SOS2Q07890 1332 aaPredicted RBP21.98■■□□□ 1.11
PHGDH-208ENST00000641023 API5Q9BZZ5 524 aaKnown RBP21.98■■□□□ 1.11
PHGDH-208ENST00000641023 CHMP4BQ9H444 224 aaKnown RBP21.98■■□□□ 1.11
PHGDH-208ENST00000641023 PCDHB15Q9Y5E8 787 aa21.98■■□□□ 1.11
PHGDH-208ENST00000641023 RGPD2P0DJD1 1756 aa21.98■■□□□ 1.11
PHGDH-208ENST00000641023 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
PHGDH-208ENST00000641023 RWDD1Q9H446 243 aaPredicted RBP21.97■■□□□ 1.11
PHGDH-208ENST00000641023 LRRC37A3O60309 1634 aa21.97■■□□□ 1.11
PHGDH-208ENST00000641023 ZNF530Q6P9A1 599 aaPredicted RBP21.95■■□□□ 1.11
PHGDH-208ENST00000641023 CPDO75976 1380 aa21.95■■□□□ 1.1
PHGDH-208ENST00000641023 CEMIPQ8WUJ3 1361 aa21.95■■□□□ 1.1
PHGDH-208ENST00000641023 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
PHGDH-208ENST00000641023 CAMTA1Q9Y6Y1 1673 aa21.94■■□□□ 1.1
PHGDH-208ENST00000641023 ABCC6O95255 1503 aa21.94■■□□□ 1.1
PHGDH-208ENST00000641023 NLRP2Q9NX02 1062 aa21.94■■□□□ 1.1
PHGDH-208ENST00000641023 ABCC4O15439 1325 aa21.93■■□□□ 1.1
PHGDH-208ENST00000641023 SOS1Q07889 1333 aaPredicted RBP21.93■■□□□ 1.1
PHGDH-208ENST00000641023 ZBTB40Q9NUA8 1239 aa21.93■■□□□ 1.1
PHGDH-208ENST00000641023 CSB-PGBD3P0DP91 1061 aa21.92■■□□□ 1.1
PHGDH-208ENST00000641023 RGPD5Q99666 1765 aa21.92■■□□□ 1.1
PHGDH-208ENST00000641023 SKAP1Q86WV1 359 aa21.91■■□□□ 1.1
PHGDH-208ENST00000641023 RAPGEF4Q8WZA2 1011 aa21.91■■□□□ 1.1
PHGDH-208ENST00000641023 PTPRCP08575 1304 aa21.91■■□□□ 1.1
PHGDH-208ENST00000641023 CHRNA2Q15822 529 aa21.91■■□□□ 1.1
PHGDH-208ENST00000641023 LGR6Q9HBX8 967 aa21.91■■□□□ 1.1
PHGDH-208ENST00000641023 CRYBG1Q9Y4K1 1723 aa21.9■■□□□ 1.1
PHGDH-208ENST00000641023 SLC4A2P04920 1241 aa21.9■■□□□ 1.1
PHGDH-208ENST00000641023 TEFQ10587 303 aa21.9■■□□□ 1.1
PHGDH-208ENST00000641023 COL18A1P39060 1754 aa21.9■■□□□ 1.1
PHGDH-208ENST00000641023 ZBTB7BO15156 539 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-208ENST00000641023 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
PHGDH-208ENST00000641023 HDAC1Q13547 482 aaPredicted RBP21.88■■□□□ 1.09
PHGDH-208ENST00000641023 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
PHGDH-208ENST00000641023 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
PHGDH-208ENST00000641023 PDE4AP27815 886 aa21.87■■□□□ 1.09
PHGDH-208ENST00000641023 CCDC30Q5VVM6 783 aa21.87■■□□□ 1.09
PHGDH-208ENST00000641023 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
PHGDH-208ENST00000641023 RNMTO43148 476 aaKnown RBP21.86■■□□□ 1.09
PHGDH-208ENST00000641023 RGS3P49796 1198 aa21.86■■□□□ 1.09
PHGDH-208ENST00000641023 PRDM11Q9NQV5 511 aa21.86■■□□□ 1.09
PHGDH-208ENST00000641023 OVOS2A0A0G2JMS6 1433 aa21.86■■□□□ 1.09
PHGDH-208ENST00000641023 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
PHGDH-208ENST00000641023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.86■■□□□ 1.09
PHGDH-208ENST00000641023 CHMP4AQ9BY43 222 aa21.85■■□□□ 1.09
PHGDH-208ENST00000641023 FAM208AQ9UK61 1670 aaKnown RBP21.85■■□□□ 1.09
PHGDH-208ENST00000641023 INTS3Q68E01 1043 aaKnown RBP21.84■■□□□ 1.09
PHGDH-208ENST00000641023 BACH2Q9BYV9 841 aa21.84■■□□□ 1.09
PHGDH-208ENST00000641023 SPG7Q9UQ90 795 aa21.84■■□□□ 1.09
PHGDH-208ENST00000641023 BTBD11A6QL63 1104 aa21.84■■□□□ 1.09
PHGDH-208ENST00000641023 NHSL1Q5SYE7 1610 aa21.82■■□□□ 1.08
PHGDH-208ENST00000641023 HOXB7P09629 217 aa21.81■■□□□ 1.08
PHGDH-208ENST00000641023 EIF4A1P60842 406 aaKnown RBP21.81■■□□□ 1.08
PHGDH-208ENST00000641023 RGS12O14924 1447 aa21.81■■□□□ 1.08
PHGDH-208ENST00000641023 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
PHGDH-208ENST00000641023 WDR17Q8IZU2 1322 aa21.79■■□□□ 1.08
PHGDH-208ENST00000641023 HDGFL1Q5TGJ6 251 aa21.79■■□□□ 1.08
PHGDH-208ENST00000641023 IFNL2Q8IZJ0 200 aa21.79■■□□□ 1.08
PHGDH-208ENST00000641023 G2E3Q7L622 706 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms