RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 HDGFL2Q7Z4V5 671 aaPredicted RBP9.87□□□□□ -0.83
RTTN-223ENST00000640931 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
RTTN-223ENST00000640931 TCP11L2Q8N4U5 519 aa9.87□□□□□ -0.83
RTTN-223ENST00000640931 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
RTTN-223ENST00000640931 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
RTTN-223ENST00000640931 EMILIN1Q9Y6C2 1016 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 USP32Q8NFA0 1604 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 CPS1P31327 1500 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 DLC1Q96QB1 1528 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 INSRP06213 1382 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 HSP90AB3PQ58FF7 597 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 AMOTL2Q9Y2J4 779 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 FER1L4A9Z1Z3 1794 aa9.86□□□□□ -0.83
RTTN-223ENST00000640931 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.85□□□□□ -0.83
RTTN-223ENST00000640931 CCDC66A2RUB6 948 aa9.85□□□□□ -0.83
RTTN-223ENST00000640931 RRS1Q15050 365 aaKnown RBP9.85□□□□□ -0.83
RTTN-223ENST00000640931 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
RTTN-223ENST00000640931 TRMT2AQ8IZ69 625 aaKnown RBP9.84□□□□□ -0.83
RTTN-223ENST00000640931 RUNDC1Q96C34 613 aa9.84□□□□□ -0.83
RTTN-223ENST00000640931 TNNQ9UQP3 1299 aa9.84□□□□□ -0.83
RTTN-223ENST00000640931 PLEKHG1Q9ULL1 1385 aa9.84□□□□□ -0.83
RTTN-223ENST00000640931 KCNJ4P48050 445 aa9.84□□□□□ -0.83
RTTN-223ENST00000640931 PIP4P2Q8N4L2 257 aa9.84□□□□□ -0.83
RTTN-223ENST00000640931 GRPEL1Q9HAV7 217 aa9.84□□□□□ -0.83
RTTN-223ENST00000640931 POLKQ9UBT6 870 aa9.84□□□□□ -0.83
RTTN-223ENST00000640931 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
RTTN-223ENST00000640931 LMOD3Q0VAK6 560 aa9.83□□□□□ -0.84
RTTN-223ENST00000640931 CFAP53Q96M91 514 aa9.83□□□□□ -0.84
RTTN-223ENST00000640931 HMOX1P09601 288 aa9.83□□□□□ -0.84
RTTN-223ENST00000640931 SLC4A3P48751 1232 aa9.83□□□□□ -0.84
RTTN-223ENST00000640931 HDGFP51858 240 aaKnown RBP9.83□□□□□ -0.84
RTTN-223ENST00000640931 BANK1Q8NDB2 785 aa9.83□□□□□ -0.84
RTTN-223ENST00000640931 BCL2L13Q9BXK5 485 aa9.83□□□□□ -0.84
RTTN-223ENST00000640931 R3HCC1Q9Y3T6 440 aaKnown RBP9.83□□□□□ -0.84
RTTN-223ENST00000640931 EID1Q9Y6B2 187 aa9.83□□□□□ -0.84
RTTN-223ENST00000640931 TULP2O00295 520 aa9.82□□□□□ -0.84
RTTN-223ENST00000640931 MSNP26038 577 aaKnown RBP9.82□□□□□ -0.84
RTTN-223ENST00000640931 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
RTTN-223ENST00000640931 CFAP44Q96MT7 982 aa9.82□□□□□ -0.84
RTTN-223ENST00000640931 PLEKHF1Q96S99 279 aa9.82□□□□□ -0.84
RTTN-223ENST00000640931 RIMS1Q86UR5 1692 aaKnown RBP9.82□□□□□ -0.84
RTTN-223ENST00000640931 NSD2O96028 1365 aa9.82□□□□□ -0.84
RTTN-223ENST00000640931 NINLQ9Y2I6 1382 aa9.82□□□□□ -0.84
RTTN-223ENST00000640931 MED14O60244 1454 aa9.82□□□□□ -0.84
RTTN-223ENST00000640931 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
RTTN-223ENST00000640931 CPSF1Q10570 1443 aaKnown RBP9.81□□□□□ -0.84
RTTN-223ENST00000640931 KCNA6P17658 529 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 HSPA2P54652 639 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 OS9Q13438 667 aaPredicted RBP9.81□□□□□ -0.84
RTTN-223ENST00000640931 TSR2Q969E8 191 aaKnown RBP9.81□□□□□ -0.84
RTTN-223ENST00000640931 TIGD1Q96MW7 591 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 ATP7BP35670 1465 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 ACEP12821 1306 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 TECPR2O15040 1411 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 BECN1Q14457 450 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 NBPF11Q86T75 865 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 KIF3AQ9Y496 699 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
RTTN-223ENST00000640931 FAM135BQ49AJ0 1406 aa9.8□□□□□ -0.84
RTTN-223ENST00000640931 SATB1Q01826 763 aa9.8□□□□□ -0.84
RTTN-223ENST00000640931 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
RTTN-223ENST00000640931 SASS6Q6UVJ0 657 aa9.8□□□□□ -0.84
RTTN-223ENST00000640931 SH3BP1Q9Y3L3 701 aa9.8□□□□□ -0.84
RTTN-223ENST00000640931 ARHGAP23Q9P227 1491 aa9.8□□□□□ -0.84
RTTN-223ENST00000640931 KIF20BQ96Q89 1820 aa9.8□□□□□ -0.84
RTTN-223ENST00000640931 DIAPH1O60610 1272 aaKnown RBP9.79□□□□□ -0.84
RTTN-223ENST00000640931 CCDC173Q0VFZ6 552 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
RTTN-223ENST00000640931 PHACTR3Q96KR7 559 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 THUMPD2Q9BTF0 503 aaKnown RBP9.79□□□□□ -0.84
RTTN-223ENST00000640931 TRIM35Q9UPQ4 493 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 TTC36A6NLP5 189 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 ZNF500O60304 480 aaPredicted RBP9.79□□□□□ -0.84
RTTN-223ENST00000640931 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
RTTN-223ENST00000640931 CBX1P83916 185 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 HS1BP3Q53T59 392 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 RAI14Q9P0K7 980 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 KNDC1Q76NI1 1749 aa9.79□□□□□ -0.84
RTTN-223ENST00000640931 MED1Q15648 1581 aaPredicted RBP9.78□□□□□ -0.84
RTTN-223ENST00000640931 TRIM6-TRIM34B2RNG4 842 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 TMPOP42166 694 aaKnown RBP9.78□□□□□ -0.84
RTTN-223ENST00000640931 ZNF771Q7L3S4 317 aaPredicted RBP9.78□□□□□ -0.84
RTTN-223ENST00000640931 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 PPP1R9BQ96SB3 815 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 MYCBPQ99417 103 aaPredicted RBP9.78□□□□□ -0.84
RTTN-223ENST00000640931 TRIM34Q9BYJ4 488 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 FOXD4L1Q9NU39 408 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 SLIT1O75093 1534 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 PRKAR2BP31323 418 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 GABPB1Q06547 395 aaPredicted RBP9.78□□□□□ -0.84
RTTN-223ENST00000640931 CHMP4CQ96CF2 233 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 SIRT1Q96EB6 747 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 TBX22Q9Y458 520 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 CEP83Q9Y592 693 aa9.78□□□□□ -0.84
RTTN-223ENST00000640931 VIRMAQ69YN4 1812 aaKnown RBP9.77□□□□□ -0.84
RTTN-223ENST00000640931 CDC42BPGQ6DT37 1551 aa9.77□□□□□ -0.84
RTTN-223ENST00000640931 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.84
RTTN-223ENST00000640931 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.84
RTTN-223ENST00000640931 GPATCH11Q8N954 259 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms