RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 IP6K1Q92551 441 aa19.55■□□□□ 0.72
SPIN3-242ENST00000640577 ARHGAP45Q92619 1136 aa19.55■□□□□ 0.72
SPIN3-242ENST00000640577 TRPM3Q9HCF6 1732 aaPredicted RBP19.55■□□□□ 0.72
SPIN3-242ENST00000640577 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
SPIN3-242ENST00000640577 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
SPIN3-242ENST00000640577 HSPA2P54652 639 aa19.54■□□□□ 0.72
SPIN3-242ENST00000640577 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
SPIN3-242ENST00000640577 ABCC4O15439 1325 aa19.53■□□□□ 0.72
SPIN3-242ENST00000640577 C19orf44Q9H6X5 657 aa19.53■□□□□ 0.72
SPIN3-242ENST00000640577 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
SPIN3-242ENST00000640577 ZBTB7BO15156 539 aaPredicted RBP19.52■□□□□ 0.72
SPIN3-242ENST00000640577 HDAC1Q13547 482 aaPredicted RBP19.52■□□□□ 0.72
SPIN3-242ENST00000640577 NBPF6Q5VWK0 638 aa19.52■□□□□ 0.72
SPIN3-242ENST00000640577 GAS2L2Q8NHY3 880 aa19.52■□□□□ 0.72
SPIN3-242ENST00000640577 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
SPIN3-242ENST00000640577 NBPF4Q96M43 638 aa19.52■□□□□ 0.72
SPIN3-242ENST00000640577 LRRC37A3O60309 1634 aa19.52■□□□□ 0.71
SPIN3-242ENST00000640577 MSH6P52701 1360 aa19.52■□□□□ 0.71
SPIN3-242ENST00000640577 KIAA0232Q92628 1395 aa19.52■□□□□ 0.71
SPIN3-242ENST00000640577 PHRF1Q9P1Y6 1649 aaKnown RBP19.51■□□□□ 0.71
SPIN3-242ENST00000640577 TMEM94Q12767 1356 aa19.51■□□□□ 0.71
SPIN3-242ENST00000640577 GCP02774 474 aa19.51■□□□□ 0.71
SPIN3-242ENST00000640577 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
SPIN3-242ENST00000640577 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
SPIN3-242ENST00000640577 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
SPIN3-242ENST00000640577 IL17REQ8NFR9 667 aa19.5■□□□□ 0.71
SPIN3-242ENST00000640577 DDX17Q92841 729 aaKnown RBP19.5■□□□□ 0.71
SPIN3-242ENST00000640577 C1orf115Q9H7X2 142 aa19.5■□□□□ 0.71
SPIN3-242ENST00000640577 SLIT3O75094 1523 aa19.49■□□□□ 0.71
SPIN3-242ENST00000640577 KCNH5Q8NCM2 988 aa19.49■□□□□ 0.71
SPIN3-242ENST00000640577 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
SPIN3-242ENST00000640577 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
SPIN3-242ENST00000640577 RGS12O14924 1447 aa19.49■□□□□ 0.71
SPIN3-242ENST00000640577 GNAT3A8MTJ3 354 aa19.49■□□□□ 0.71
SPIN3-242ENST00000640577 ARHGEF25Q86VW2 580 aa19.48■□□□□ 0.71
SPIN3-242ENST00000640577 MST1RQ04912 1400 aa19.47■□□□□ 0.71
SPIN3-242ENST00000640577 KIF1AQ12756 1690 aa19.47■□□□□ 0.71
SPIN3-242ENST00000640577 SMC5Q8IY18 1101 aa19.47■□□□□ 0.71
SPIN3-242ENST00000640577 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
SPIN3-242ENST00000640577 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
SPIN3-242ENST00000640577 SEC24BO95487 1268 aa19.46■□□□□ 0.71
SPIN3-242ENST00000640577 USP19O94966 1318 aa19.46■□□□□ 0.71
SPIN3-242ENST00000640577 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
SPIN3-242ENST00000640577 API5Q9BZZ5 524 aaKnown RBP19.45■□□□□ 0.7
SPIN3-242ENST00000640577 AXIN2Q9Y2T1 843 aa19.45■□□□□ 0.7
SPIN3-242ENST00000640577 ALS2Q96Q42 1657 aa19.45■□□□□ 0.7
SPIN3-242ENST00000640577 SIRT2Q8IXJ6 389 aa19.44■□□□□ 0.7
SPIN3-242ENST00000640577 ATF3P18847 181 aa19.43■□□□□ 0.7
SPIN3-242ENST00000640577 G2E3Q7L622 706 aa19.43■□□□□ 0.7
SPIN3-242ENST00000640577 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
SPIN3-242ENST00000640577 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
SPIN3-242ENST00000640577 ZBTB47Q9UFB7 747 aaPredicted RBP19.43■□□□□ 0.7
SPIN3-242ENST00000640577 XIRP1Q702N8 1843 aaKnown RBP19.42■□□□□ 0.7
SPIN3-242ENST00000640577 INTS3Q68E01 1043 aaKnown RBP19.41■□□□□ 0.7
SPIN3-242ENST00000640577 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
SPIN3-242ENST00000640577 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
SPIN3-242ENST00000640577 ANKRD24Q8TF21 1146 aa19.4■□□□□ 0.7
SPIN3-242ENST00000640577 ZC3H6P61129 1189 aaKnown RBP19.39■□□□□ 0.69
SPIN3-242ENST00000640577 STRCQ7RTU9 1775 aa19.39■□□□□ 0.69
SPIN3-242ENST00000640577 KDM4FA0A1W2PPD8 638 aa19.39■□□□□ 0.69
SPIN3-242ENST00000640577 NUCB1Q02818 461 aa19.39■□□□□ 0.69
SPIN3-242ENST00000640577 TAF7Q15545 349 aaPredicted RBP19.39■□□□□ 0.69
SPIN3-242ENST00000640577 CEMIPQ8WUJ3 1361 aa19.38■□□□□ 0.69
SPIN3-242ENST00000640577 FAM208AQ9UK61 1670 aaKnown RBP19.38■□□□□ 0.69
SPIN3-242ENST00000640577 DCCP43146 1447 aa19.38■□□□□ 0.69
SPIN3-242ENST00000640577 NCAPD2Q15021 1401 aa19.38■□□□□ 0.69
SPIN3-242ENST00000640577 NECTIN2Q92692 538 aa19.38■□□□□ 0.69
SPIN3-242ENST00000640577 PXDNQ92626 1479 aa19.38■□□□□ 0.69
SPIN3-242ENST00000640577 PTPRCP08575 1304 aa19.37■□□□□ 0.69
SPIN3-242ENST00000640577 LMO7Q8WWI1 1683 aa19.37■□□□□ 0.69
SPIN3-242ENST00000640577 F6X3S4 739 aa19.37■□□□□ 0.69
SPIN3-242ENST00000640577 LNPKQ9C0E8 428 aa19.37■□□□□ 0.69
SPIN3-242ENST00000640577 LMTK3Q96Q04 1460 aa19.36■□□□□ 0.69
SPIN3-242ENST00000640577 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
SPIN3-242ENST00000640577 CAMTA1Q9Y6Y1 1673 aa19.36■□□□□ 0.69
SPIN3-242ENST00000640577 CHMP4BQ9H444 224 aaKnown RBP19.35■□□□□ 0.69
SPIN3-242ENST00000640577 NCOA3Q9Y6Q9 1424 aa19.35■□□□□ 0.69
SPIN3-242ENST00000640577 ZNF530Q6P9A1 599 aaPredicted RBP19.34■□□□□ 0.69
SPIN3-242ENST00000640577 CHD1LQ86WJ1 897 aa19.34■□□□□ 0.69
SPIN3-242ENST00000640577 ATP10DQ9P241 1426 aa19.34■□□□□ 0.69
SPIN3-242ENST00000640577 MPRIPQ6WCQ1 1025 aa19.34■□□□□ 0.69
SPIN3-242ENST00000640577 CADPS2Q86UW7 1296 aa19.34■□□□□ 0.69
SPIN3-242ENST00000640577 MEIS3Q99687 375 aa19.34■□□□□ 0.69
SPIN3-242ENST00000640577 SLC4A3P48751 1232 aa19.33■□□□□ 0.69
SPIN3-242ENST00000640577 CACNA1FO60840 1977 aa19.33■□□□□ 0.69
SPIN3-242ENST00000640577 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.68
SPIN3-242ENST00000640577 KCNQ3O43525 872 aa19.33■□□□□ 0.68
SPIN3-242ENST00000640577 ERBB3P21860 1342 aa19.33■□□□□ 0.68
SPIN3-242ENST00000640577 ANKRD45Q5TZF3 282 aa19.32■□□□□ 0.68
SPIN3-242ENST00000640577 COL18A1P39060 1754 aa19.32■□□□□ 0.68
SPIN3-242ENST00000640577 CRYBG1Q9Y4K1 1723 aa19.32■□□□□ 0.68
SPIN3-242ENST00000640577 SLC4A10Q6U841 1118 aa19.32■□□□□ 0.68
SPIN3-242ENST00000640577 BABAM1Q9NWV8 329 aa19.32■□□□□ 0.68
SPIN3-242ENST00000640577 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
SPIN3-242ENST00000640577 AKAP4Q5JQC9 854 aa19.31■□□□□ 0.68
SPIN3-242ENST00000640577 GCC1Q96CN9 775 aa19.31■□□□□ 0.68
SPIN3-242ENST00000640577 NPHP3Q7Z494 1330 aa19.3■□□□□ 0.68
SPIN3-242ENST00000640577 FLIIQ13045 1269 aa19.3■□□□□ 0.68
SPIN3-242ENST00000640577 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
SPIN3-242ENST00000640577 STK31Q9BXU1 1019 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms