RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
NECAP1-226ENST00000640481 ZBTB47Q9UFB7 747 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-226ENST00000640481 KIF24Q5T7B8 1368 aa8.59□□□□□ -1.03
NECAP1-226ENST00000640481 GAS2L2Q8NHY3 880 aa8.59□□□□□ -1.03
NECAP1-226ENST00000640481 USHBP1Q8N6Y0 703 aa8.58□□□□□ -1.04
NECAP1-226ENST00000640481 ZBTB7BO15156 539 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-226ENST00000640481 HDAC1Q13547 482 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-226ENST00000640481 IP6K1Q92551 441 aa8.58□□□□□ -1.04
NECAP1-226ENST00000640481 CRB1P82279 1406 aa8.58□□□□□ -1.04
NECAP1-226ENST00000640481 MARF1Q9Y4F3 1742 aaKnown RBP8.58□□□□□ -1.04
NECAP1-226ENST00000640481 C19orf44Q9H6X5 657 aa8.58□□□□□ -1.04
NECAP1-226ENST00000640481 TSPYL4Q9UJ04 414 aa8.58□□□□□ -1.04
NECAP1-226ENST00000640481 KCNH5Q8NCM2 988 aa8.57□□□□□ -1.04
NECAP1-226ENST00000640481 HAP1P54257 671 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-226ENST00000640481 NBPF6Q5VWK0 638 aa8.57□□□□□ -1.04
NECAP1-226ENST00000640481 NBPF4Q96M43 638 aa8.57□□□□□ -1.04
NECAP1-226ENST00000640481 API5Q9BZZ5 524 aaKnown RBP8.57□□□□□ -1.04
NECAP1-226ENST00000640481 ABCC4O15439 1325 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 GNAT3A8MTJ3 354 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 GCP02774 474 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 C1orf115Q9H7X2 142 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 KIAA0232Q92628 1395 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 KRT28Q7Z3Y7 464 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 SMC5Q8IY18 1101 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 IL17REQ8NFR9 667 aa8.56□□□□□ -1.04
NECAP1-226ENST00000640481 RTL1A6NKG5 1358 aa8.55□□□□□ -1.04
NECAP1-226ENST00000640481 HTATSF1O43719 755 aaKnown RBP8.55□□□□□ -1.04
NECAP1-226ENST00000640481 HSPA2P54652 639 aa8.55□□□□□ -1.04
NECAP1-226ENST00000640481 CHMP4BQ9H444 224 aaKnown RBP8.55□□□□□ -1.04
NECAP1-226ENST00000640481 USP54Q70EL1 1684 aa8.55□□□□□ -1.04
NECAP1-226ENST00000640481 NWD1Q149M9 1564 aa8.55□□□□□ -1.04
NECAP1-226ENST00000640481 SLC4A2P04920 1241 aa8.55□□□□□ -1.04
NECAP1-226ENST00000640481 SEC24BO95487 1268 aa8.54□□□□□ -1.04
NECAP1-226ENST00000640481 ARHGEF25Q86VW2 580 aa8.54□□□□□ -1.04
NECAP1-226ENST00000640481 LRRC59Q96AG4 307 aaKnown RBP8.54□□□□□ -1.04
NECAP1-226ENST00000640481 NFAT5O94916 1531 aa8.54□□□□□ -1.04
NECAP1-226ENST00000640481 C1orf167Q5SNV9 1468 aa8.54□□□□□ -1.04
NECAP1-226ENST00000640481 ATF3P18847 181 aa8.54□□□□□ -1.04
NECAP1-226ENST00000640481 DDX17Q92841 729 aaKnown RBP8.54□□□□□ -1.04
NECAP1-226ENST00000640481 TMEM94Q12767 1356 aa8.53□□□□□ -1.04
NECAP1-226ENST00000640481 LTN1O94822 1766 aa8.53□□□□□ -1.04
NECAP1-226ENST00000640481 TAF7Q15545 349 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-226ENST00000640481 G2E3Q7L622 706 aa8.53□□□□□ -1.04
NECAP1-226ENST00000640481 SIRT2Q8IXJ6 389 aa8.53□□□□□ -1.04
NECAP1-226ENST00000640481 MSH6P52701 1360 aa8.53□□□□□ -1.04
NECAP1-226ENST00000640481 MAP3K5Q99683 1374 aa8.53□□□□□ -1.04
NECAP1-226ENST00000640481 INTS3Q68E01 1043 aaKnown RBP8.52□□□□□ -1.04
NECAP1-226ENST00000640481 LNPKQ9C0E8 428 aa8.52□□□□□ -1.04
NECAP1-226ENST00000640481 AXIN2Q9Y2T1 843 aa8.52□□□□□ -1.04
NECAP1-226ENST00000640481 ZC3H6P61129 1189 aaKnown RBP8.52□□□□□ -1.05
NECAP1-226ENST00000640481 NECTIN2Q92692 538 aa8.52□□□□□ -1.05
NECAP1-226ENST00000640481 DDRGK1Q96HY6 314 aa8.52□□□□□ -1.05
NECAP1-226ENST00000640481 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
NECAP1-226ENST00000640481 NUCB1Q02818 461 aa8.52□□□□□ -1.05
NECAP1-226ENST00000640481 PTPRCP08575 1304 aa8.51□□□□□ -1.05
NECAP1-226ENST00000640481 ANKRD45Q5TZF3 282 aa8.51□□□□□ -1.05
NECAP1-226ENST00000640481 ANKRD24Q8TF21 1146 aa8.51□□□□□ -1.05
NECAP1-226ENST00000640481 USP19O94966 1318 aa8.51□□□□□ -1.05
NECAP1-226ENST00000640481 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
NECAP1-226ENST00000640481 CHD1LQ86WJ1 897 aa8.51□□□□□ -1.05
NECAP1-226ENST00000640481 RGS12O14924 1447 aa8.51□□□□□ -1.05
NECAP1-226ENST00000640481 F6X3S4 739 aa8.5□□□□□ -1.05
NECAP1-226ENST00000640481 SLC4A10Q6U841 1118 aa8.5□□□□□ -1.05
NECAP1-226ENST00000640481 GCC1Q96CN9 775 aa8.5□□□□□ -1.05
NECAP1-226ENST00000640481 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
NECAP1-226ENST00000640481 PLEKHO1Q53GL0 409 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-226ENST00000640481 ZNF530Q6P9A1 599 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-226ENST00000640481 CCDC30Q5VVM6 783 aa8.5□□□□□ -1.05
NECAP1-226ENST00000640481 CADPS2Q86UW7 1296 aa8.5□□□□□ -1.05
NECAP1-226ENST00000640481 MST1RQ04912 1400 aa8.49□□□□□ -1.05
NECAP1-226ENST00000640481 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
NECAP1-226ENST00000640481 MEIS3Q99687 375 aa8.49□□□□□ -1.05
NECAP1-226ENST00000640481 BABAM1Q9NWV8 329 aa8.49□□□□□ -1.05
NECAP1-226ENST00000640481 RGPD2P0DJD1 1756 aa8.49□□□□□ -1.05
NECAP1-226ENST00000640481 SLIT3O75094 1523 aa8.49□□□□□ -1.05
NECAP1-226ENST00000640481 NBR1Q14596 966 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 AKAP4Q5JQC9 854 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 STRCP1A6NGW2 1772 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 FLIIQ13045 1269 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-226ENST00000640481 AMOTQ4VCS5 1084 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 TRPM3Q9HCF6 1732 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-226ENST00000640481 TEFQ10587 303 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 ANKRD44Q8N8A2 993 aa8.48□□□□□ -1.05
NECAP1-226ENST00000640481 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
NECAP1-226ENST00000640481 KCNQ3O43525 872 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 EIF2S2P20042 333 aaKnown RBP8.47□□□□□ -1.05
NECAP1-226ENST00000640481 C1orf141Q5JVX7 400 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 HDGFL1Q5TGJ6 251 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 CEP85Q6P2H3 762 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 RPAP2Q8IXW5 612 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-226ENST00000640481 DCTPP1Q9H773 170 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 NPHP3Q7Z494 1330 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 ERBB3P21860 1342 aa8.47□□□□□ -1.05
NECAP1-226ENST00000640481 CCT4P50991 539 aaKnown RBP8.47□□□□□ -1.05
NECAP1-226ENST00000640481 EIF4A1P60842 406 aaKnown RBP8.47□□□□□ -1.05
NECAP1-226ENST00000640481 KIF1AQ12756 1690 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms