RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
NECAP1-223ENST00000640091 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 PLEKHO1Q53GL0 409 aaPredicted RBP13.57□□□□□ -0.24
NECAP1-223ENST00000640091 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 RAPGEF4Q8WZA2 1011 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
NECAP1-223ENST00000640091 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
NECAP1-223ENST00000640091 WDR17Q8IZU2 1322 aa13.56□□□□□ -0.24
NECAP1-223ENST00000640091 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
NECAP1-223ENST00000640091 BCL2L13Q9BXK5 485 aa13.55□□□□□ -0.24
NECAP1-223ENST00000640091 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
NECAP1-223ENST00000640091 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
NECAP1-223ENST00000640091 AMOTQ4VCS5 1084 aa13.55□□□□□ -0.24
NECAP1-223ENST00000640091 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
NECAP1-223ENST00000640091 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
NECAP1-223ENST00000640091 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
NECAP1-223ENST00000640091 MPRIPQ6WCQ1 1025 aa13.54□□□□□ -0.24
NECAP1-223ENST00000640091 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
NECAP1-223ENST00000640091 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
NECAP1-223ENST00000640091 TATP17735 454 aaPredicted RBP13.54□□□□□ -0.24
NECAP1-223ENST00000640091 TSPYL6Q8N831 410 aa13.54□□□□□ -0.24
NECAP1-223ENST00000640091 ABCA3Q99758 1704 aa13.54□□□□□ -0.24
NECAP1-223ENST00000640091 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
NECAP1-223ENST00000640091 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
NECAP1-223ENST00000640091 CHL1O00533 1208 aa13.53□□□□□ -0.24
NECAP1-223ENST00000640091 C20orf194Q5TEA3 1177 aa13.53□□□□□ -0.24
NECAP1-223ENST00000640091 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.24
NECAP1-223ENST00000640091 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.24
NECAP1-223ENST00000640091 CRB1P82279 1406 aa13.52□□□□□ -0.24
NECAP1-223ENST00000640091 KRT24Q2M2I5 525 aa13.52□□□□□ -0.25
NECAP1-223ENST00000640091 C8orf58Q8NAV2 365 aa13.52□□□□□ -0.25
NECAP1-223ENST00000640091 ABCC6O95255 1503 aa13.51□□□□□ -0.25
NECAP1-223ENST00000640091 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
NECAP1-223ENST00000640091 MEGF6O75095 1541 aa13.51□□□□□ -0.25
NECAP1-223ENST00000640091 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
NECAP1-223ENST00000640091 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
NECAP1-223ENST00000640091 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
NECAP1-223ENST00000640091 VAMP4O75379 141 aa13.5□□□□□ -0.25
NECAP1-223ENST00000640091 SSH1Q8WYL5 1049 aa13.5□□□□□ -0.25
NECAP1-223ENST00000640091 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
NECAP1-223ENST00000640091 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
NECAP1-223ENST00000640091 TAF7Q15545 349 aaPredicted RBP13.49□□□□□ -0.25
NECAP1-223ENST00000640091 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
NECAP1-223ENST00000640091 CT47B1P0C2W7 299 aaPredicted RBP13.49□□□□□ -0.25
NECAP1-223ENST00000640091 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
NECAP1-223ENST00000640091 EXOC6Q8TAG9 804 aa13.49□□□□□ -0.25
NECAP1-223ENST00000640091 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
NECAP1-223ENST00000640091 FAM208AQ9UK61 1670 aaKnown RBP13.48□□□□□ -0.25
NECAP1-223ENST00000640091 CYP27B1O15528 508 aa13.48□□□□□ -0.25
NECAP1-223ENST00000640091 RNMTO43148 476 aaKnown RBP13.48□□□□□ -0.25
NECAP1-223ENST00000640091 CANXP27824 592 aaKnown RBP13.48□□□□□ -0.25
NECAP1-223ENST00000640091 SMC4Q9NTJ3 1288 aa13.48□□□□□ -0.25
NECAP1-223ENST00000640091 IL2RBP14784 551 aa13.48□□□□□ -0.25
NECAP1-223ENST00000640091 PHKG2P15735 406 aa13.48□□□□□ -0.25
NECAP1-223ENST00000640091 HSPA1LP34931 641 aa13.48□□□□□ -0.25
NECAP1-223ENST00000640091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
NECAP1-223ENST00000640091 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
NECAP1-223ENST00000640091 TEFQ10587 303 aa13.47□□□□□ -0.25
NECAP1-223ENST00000640091 IFNL2Q8IZJ0 200 aa13.47□□□□□ -0.25
NECAP1-223ENST00000640091 ZCRB1Q8TBF4 217 aaKnown RBP13.46□□□□□ -0.25
NECAP1-223ENST00000640091 CRBNQ96SW2 442 aa13.46□□□□□ -0.25
NECAP1-223ENST00000640091 TNNQ9UQP3 1299 aa13.46□□□□□ -0.25
NECAP1-223ENST00000640091 JCADQ9P266 1359 aa13.46□□□□□ -0.25
NECAP1-223ENST00000640091 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.26
NECAP1-223ENST00000640091 DDX54Q8TDD1 881 aaKnown RBP13.46□□□□□ -0.26
NECAP1-223ENST00000640091 CLUAP1Q96AJ1 413 aa13.45□□□□□ -0.26
NECAP1-223ENST00000640091 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
NECAP1-223ENST00000640091 KCNQ3O43525 872 aa13.45□□□□□ -0.26
NECAP1-223ENST00000640091 B4GALNT3Q6L9W6 998 aa13.45□□□□□ -0.26
NECAP1-223ENST00000640091 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
NECAP1-223ENST00000640091 C8orf37Q96NL8 207 aa13.45□□□□□ -0.26
NECAP1-223ENST00000640091 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
NECAP1-223ENST00000640091 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
NECAP1-223ENST00000640091 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
NECAP1-223ENST00000640091 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
NECAP1-223ENST00000640091 OVOS2A0A0G2JMS6 1433 aa13.44□□□□□ -0.26
NECAP1-223ENST00000640091 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
NECAP1-223ENST00000640091 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
NECAP1-223ENST00000640091 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
NECAP1-223ENST00000640091 RLBP1P12271 317 aa13.42□□□□□ -0.26
NECAP1-223ENST00000640091 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
NECAP1-223ENST00000640091 DCAF5Q96JK2 942 aa13.42□□□□□ -0.26
NECAP1-223ENST00000640091 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
NECAP1-223ENST00000640091 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
NECAP1-223ENST00000640091 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
NECAP1-223ENST00000640091 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
NECAP1-223ENST00000640091 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
NECAP1-223ENST00000640091 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
NECAP1-223ENST00000640091 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
NECAP1-223ENST00000640091 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
NECAP1-223ENST00000640091 PDE3AQ14432 1141 aa13.41□□□□□ -0.26
NECAP1-223ENST00000640091 SLC52A2Q9HAB3 445 aa13.41□□□□□ -0.26
NECAP1-223ENST00000640091 TRIM27P14373 513 aa13.4□□□□□ -0.26
NECAP1-223ENST00000640091 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms