RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 ZCRB1Q8TBF4 217 aaKnown RBP21.4■■□□□ 1.02
SPIN3-233ENST00000640039 NCAPD2Q15021 1401 aa21.39■■□□□ 1.02
SPIN3-233ENST00000640039 DDX54Q8TDD1 881 aaKnown RBP21.39■■□□□ 1.01
SPIN3-233ENST00000640039 BCL9O00512 1426 aa21.38■■□□□ 1.01
SPIN3-233ENST00000640039 IGSF1Q8N6C5 1336 aa21.37■■□□□ 1.01
SPIN3-233ENST00000640039 SBF2Q86WG5 1849 aa21.36■■□□□ 1.01
SPIN3-233ENST00000640039 R3HDM1Q15032 1099 aaKnown RBP21.35■■□□□ 1.01
SPIN3-233ENST00000640039 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
SPIN3-233ENST00000640039 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
SPIN3-233ENST00000640039 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
SPIN3-233ENST00000640039 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
SPIN3-233ENST00000640039 APBA3O96018 575 aa21.34■■□□□ 1.01
SPIN3-233ENST00000640039 IL13P35225 146 aa21.34■■□□□ 1.01
SPIN3-233ENST00000640039 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
SPIN3-233ENST00000640039 SHANK3Q9BYB0 1731 aa21.33■■□□□ 1.01
SPIN3-233ENST00000640039 SPG7Q9UQ90 795 aa21.33■■□□□ 1.01
SPIN3-233ENST00000640039 RREB1Q92766 1687 aa21.33■■□□□ 1
SPIN3-233ENST00000640039 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
SPIN3-233ENST00000640039 PPP2R1AP30153 589 aa21.32■■□□□ 1
SPIN3-233ENST00000640039 BCL11BQ9C0K0 894 aaPredicted RBP21.32■■□□□ 1
SPIN3-233ENST00000640039 PKD1L3Q7Z443 1732 aa21.32■■□□□ 1
SPIN3-233ENST00000640039 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
SPIN3-233ENST00000640039 ACSBG1Q96GR2 724 aa21.31■■□□□ 1
SPIN3-233ENST00000640039 SULT6B1Q6IMI4 303 aa21.3■■□□□ 1
SPIN3-233ENST00000640039 PLEKHG2Q9H7P9 1386 aa21.3■■□□□ 1
SPIN3-233ENST00000640039 NHSQ6T4R5 1651 aa21.29■■□□□ 1
SPIN3-233ENST00000640039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 11e-6■□□□□ 10.8
SPIN3-233ENST00000640039 NUP188Q5SRE5 1749 aa21.29■■□□□ 1
SPIN3-233ENST00000640039 COL3A1P02461 1466 aaPredicted RBP21.28■■□□□ 1
SPIN3-233ENST00000640039 RALBP1Q15311 655 aa21.28■■□□□ 1
SPIN3-233ENST00000640039 AEBP1Q8IUX7 1158 aa21.28■■□□□ 1
SPIN3-233ENST00000640039 KDRP35968 1356 aa21.27■■□□□ 1
SPIN3-233ENST00000640039 U2SURPO15042 1029 aaKnown RBP21.27■■□□□ 1
SPIN3-233ENST00000640039 KCNQ2O43526 872 aa21.26■□□□□ 0.99
SPIN3-233ENST00000640039 PLEKHO1Q53GL0 409 aaPredicted RBP21.26■□□□□ 0.99
SPIN3-233ENST00000640039 SYTL4Q96C24 671 aaPredicted RBP21.26■□□□□ 0.99
SPIN3-233ENST00000640039 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
SPIN3-233ENST00000640039 DOT1LQ8TEK3 1739 aa21.26■□□□□ 0.99
SPIN3-233ENST00000640039 CYP27B1O15528 508 aa21.25■□□□□ 0.99
SPIN3-233ENST00000640039 HMOX1P09601 288 aa21.25■□□□□ 0.99
SPIN3-233ENST00000640039 AMOTQ4VCS5 1084 aa21.25■□□□□ 0.99
SPIN3-233ENST00000640039 PTF1AQ7RTS3 328 aa21.25■□□□□ 0.99
SPIN3-233ENST00000640039 IFNL2Q8IZJ0 200 aa21.24■□□□□ 0.99
SPIN3-233ENST00000640039 PLSCR1O15162 318 aa21.23■□□□□ 0.99
SPIN3-233ENST00000640039 RGPD3A6NKT7 1758 aaPredicted RBP21.23■□□□□ 0.99
SPIN3-233ENST00000640039 RGPD4Q7Z3J3 1758 aa21.23■□□□□ 0.99
SPIN3-233ENST00000640039 PRIM1P49642 420 aaKnown RBP21.22■□□□□ 0.99
SPIN3-233ENST00000640039 BTAF1O14981 1849 aa21.22■□□□□ 0.99
SPIN3-233ENST00000640039 PHKG2P15735 406 aa21.21■□□□□ 0.99
SPIN3-233ENST00000640039 ZNF530Q6P9A1 599 aaPredicted RBP21.21■□□□□ 0.99
SPIN3-233ENST00000640039 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
SPIN3-233ENST00000640039 C1orf141Q5JVX7 400 aa21.2■□□□□ 0.98
SPIN3-233ENST00000640039 NKX1-1Q15270 411 aaPredicted RBP21.19■□□□□ 0.98
SPIN3-233ENST00000640039 MYBBP1AQ9BQG0 1328 aaKnown RBP21.19■□□□□ 0.98
SPIN3-233ENST00000640039 U2AF1L5P0DN76 240 aaPredicted RBP21.18■□□□□ 0.98
SPIN3-233ENST00000640039 U2AF1Q01081 240 aaKnown RBP eCLIP21.18■□□□□ 0.98
SPIN3-233ENST00000640039 NBPF14Q5TI25 921 aa21.18■□□□□ 0.98
SPIN3-233ENST00000640039 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
SPIN3-233ENST00000640039 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
SPIN3-233ENST00000640039 DCAF5Q96JK2 942 aa21.15■□□□□ 0.98
SPIN3-233ENST00000640039 PRKRIP1Q9H875 184 aaPredicted RBP21.15■□□□□ 0.98
SPIN3-233ENST00000640039 ITGB4P16144 1822 aa21.14■□□□□ 0.97
SPIN3-233ENST00000640039 TXNRD1Q16881 649 aa21.14■□□□□ 0.97
SPIN3-233ENST00000640039 PROM2Q8N271 834 aa21.14■□□□□ 0.97
SPIN3-233ENST00000640039 TMOD3Q9NYL9 352 aa21.13■□□□□ 0.97
SPIN3-233ENST00000640039 PRKAR2BP31323 418 aa21.12■□□□□ 0.97
SPIN3-233ENST00000640039 AKAP4Q5JQC9 854 aa21.12■□□□□ 0.97
SPIN3-233ENST00000640039 ANO8Q9HCE9 1232 aaPredicted RBP21.12■□□□□ 0.97
SPIN3-233ENST00000640039 FCHSD2O94868 740 aa21.11■□□□□ 0.97
SPIN3-233ENST00000640039 GAS2L2Q8NHY3 880 aa21.11■□□□□ 0.97
SPIN3-233ENST00000640039 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
SPIN3-233ENST00000640039 ERVV-2B6SEH9 535 aa21.1■□□□□ 0.97
SPIN3-233ENST00000640039 NEFMP07197 916 aa21.1■□□□□ 0.97
SPIN3-233ENST00000640039 MTHFSDQ2M296 383 aaKnown RBP21.1■□□□□ 0.97
SPIN3-233ENST00000640039 PIGBQ92521 554 aa21.09■□□□□ 0.97
SPIN3-233ENST00000640039 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
SPIN3-233ENST00000640039 KDM6AO15550 1401 aaPredicted RBP21.09■□□□□ 0.97
SPIN3-233ENST00000640039 CABP4P57796 275 aa21.08■□□□□ 0.97
SPIN3-233ENST00000640039 SLC27A3Q5K4L6 730 aa21.08■□□□□ 0.97
SPIN3-233ENST00000640039 SPON1Q9HCB6 807 aa21.08■□□□□ 0.97
SPIN3-233ENST00000640039 CASZ1Q86V15 1759 aa21.08■□□□□ 0.96
SPIN3-233ENST00000640039 LY75O60449 1722 aa21.07■□□□□ 0.96
SPIN3-233ENST00000640039 PALLDQ8WX93 1383 aa21.07■□□□□ 0.96
SPIN3-233ENST00000640039 SCN11AQ9UI33 1791 aa21.06■□□□□ 0.96
SPIN3-233ENST00000640039 ANP32CO43423 234 aa21.06■□□□□ 0.96
SPIN3-233ENST00000640039 PNNQ9H307 717 aaKnown RBP21.06■□□□□ 0.96
SPIN3-233ENST00000640039 PHACTR3Q96KR7 559 aa21.05■□□□□ 0.96
SPIN3-233ENST00000640039 PDGFDQ9GZP0 370 aaPredicted RBP21.05■□□□□ 0.96
SPIN3-233ENST00000640039 STK32BQ9NY57 414 aa21.05■□□□□ 0.96
SPIN3-233ENST00000640039 CCNL1Q9UK58 526 aaPredicted RBP21.05■□□□□ 0.96
SPIN3-233ENST00000640039 MAP3K5Q99683 1374 aa21.05■□□□□ 0.96
SPIN3-233ENST00000640039 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
SPIN3-233ENST00000640039 RNMTO43148 476 aaKnown RBP21.03■□□□□ 0.96
SPIN3-233ENST00000640039 HMGB2P26583 209 aaKnown RBP21.03■□□□□ 0.96
SPIN3-233ENST00000640039 WDR43Q15061 677 aaKnown RBP eCLIP21.03■□□□□ 0.96
SPIN3-233ENST00000640039 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
SPIN3-233ENST00000640039 VIRMAQ69YN4 1812 aaKnown RBP21.02■□□□□ 0.96
SPIN3-233ENST00000640039 ASAP1Q9ULH1 1129 aa21.02■□□□□ 0.96
SPIN3-233ENST00000640039 MAPK8IP3Q9UPT6 1336 aa21.02■□□□□ 0.95
SPIN3-233ENST00000640039 KCNQ4P56696 695 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms