RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
TRIM43B-202ENST00000639673 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
TRIM43B-202ENST00000639673 PLSCR1O15162 318 aa13.65□□□□□ -0.22
TRIM43B-202ENST00000639673 NSD2O96028 1365 aa13.64□□□□□ -0.23
TRIM43B-202ENST00000639673 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
TRIM43B-202ENST00000639673 PROM2Q8N271 834 aa13.63□□□□□ -0.23
TRIM43B-202ENST00000639673 ZCRB1Q8TBF4 217 aaKnown RBP13.63□□□□□ -0.23
TRIM43B-202ENST00000639673 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
TRIM43B-202ENST00000639673 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
TRIM43B-202ENST00000639673 DOT1LQ8TEK3 1739 aa13.62□□□□□ -0.23
TRIM43B-202ENST00000639673 BTAF1O14981 1849 aa13.62□□□□□ -0.23
TRIM43B-202ENST00000639673 NBPF14Q5TI25 921 aa13.62□□□□□ -0.23
TRIM43B-202ENST00000639673 LRP5O75197 1615 aa13.61□□□□□ -0.23
TRIM43B-202ENST00000639673 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
TRIM43B-202ENST00000639673 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
TRIM43B-202ENST00000639673 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
TRIM43B-202ENST00000639673 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
TRIM43B-202ENST00000639673 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
TRIM43B-202ENST00000639673 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
TRIM43B-202ENST00000639673 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
TRIM43B-202ENST00000639673 EYA1Q99502 592 aa13.59□□□□□ -0.23
TRIM43B-202ENST00000639673 KAT6BQ8WYB5 2073 aa13.59□□□□□ -0.23
TRIM43B-202ENST00000639673 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
TRIM43B-202ENST00000639673 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
TRIM43B-202ENST00000639673 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.24
TRIM43B-202ENST00000639673 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
TRIM43B-202ENST00000639673 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
TRIM43B-202ENST00000639673 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
TRIM43B-202ENST00000639673 PAPPAQ13219 1627 aa13.56□□□□□ -0.24
TRIM43B-202ENST00000639673 CYP27B1O15528 508 aa13.56□□□□□ -0.24
TRIM43B-202ENST00000639673 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
TRIM43B-202ENST00000639673 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
TRIM43B-202ENST00000639673 IGSF1Q8N6C5 1336 aa13.54□□□□□ -0.24
TRIM43B-202ENST00000639673 PDGFDQ9GZP0 370 aaPredicted RBP13.54□□□□□ -0.24
TRIM43B-202ENST00000639673 LRRC4BQ9NT99 713 aa13.54□□□□□ -0.24
TRIM43B-202ENST00000639673 CASZ1Q86V15 1759 aa13.54□□□□□ -0.24
TRIM43B-202ENST00000639673 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
TRIM43B-202ENST00000639673 STK32BQ9NY57 414 aa13.53□□□□□ -0.24
TRIM43B-202ENST00000639673 KCNQ4P56696 695 aa13.53□□□□□ -0.24
TRIM43B-202ENST00000639673 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
TRIM43B-202ENST00000639673 SPG7Q9UQ90 795 aa13.53□□□□□ -0.24
TRIM43B-202ENST00000639673 LY75O60449 1722 aa13.52□□□□□ -0.25
TRIM43B-202ENST00000639673 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
TRIM43B-202ENST00000639673 AEBP1Q8IUX7 1158 aa13.51□□□□□ -0.25
TRIM43B-202ENST00000639673 MTHFSP49914 203 aa13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 PHKG2P15735 406 aa13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 IL13P35225 146 aa13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
TRIM43B-202ENST00000639673 ITGB4P16144 1822 aa13.49□□□□□ -0.25
TRIM43B-202ENST00000639673 NPC1L1Q9UHC9 1359 aa13.49□□□□□ -0.25
TRIM43B-202ENST00000639673 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
TRIM43B-202ENST00000639673 SPON1Q9HCB6 807 aa13.49□□□□□ -0.25
TRIM43B-202ENST00000639673 SULT6B1Q6IMI4 303 aa13.48□□□□□ -0.25
TRIM43B-202ENST00000639673 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
TRIM43B-202ENST00000639673 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
TRIM43B-202ENST00000639673 PALLDQ8WX93 1383 aa13.47□□□□□ -0.25
TRIM43B-202ENST00000639673 PLEKHG2Q9H7P9 1386 aa13.47□□□□□ -0.25
TRIM43B-202ENST00000639673 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
TRIM43B-202ENST00000639673 PIGBQ92521 554 aa13.47□□□□□ -0.25
TRIM43B-202ENST00000639673 KDRP35968 1356 aa13.46□□□□□ -0.25
TRIM43B-202ENST00000639673 TUBGCP6Q96RT7 1819 aa13.46□□□□□ -0.25
TRIM43B-202ENST00000639673 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.26
TRIM43B-202ENST00000639673 ZNF530Q6P9A1 599 aaPredicted RBP13.45□□□□□ -0.26
TRIM43B-202ENST00000639673 PPP1R1BQ9UD71 204 aaPredicted RBP13.45□□□□□ -0.26
TRIM43B-202ENST00000639673 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
TRIM43B-202ENST00000639673 HMOX1P09601 288 aa13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 TMOD3Q9NYL9 352 aa13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 C5P01031 1676 aa13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 PTGER2P43116 358 aa13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
TRIM43B-202ENST00000639673 PNPLA7Q6ZV29 1317 aa13.43□□□□□ -0.26
TRIM43B-202ENST00000639673 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
TRIM43B-202ENST00000639673 MTFR1LQ9H019 292 aa13.43□□□□□ -0.26
TRIM43B-202ENST00000639673 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
TRIM43B-202ENST00000639673 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
TRIM43B-202ENST00000639673 TAF1LQ8IZX4 1826 aa13.42□□□□□ -0.26
TRIM43B-202ENST00000639673 HSP90AB1P08238 724 aaKnown RBP13.41□□□□□ -0.26
TRIM43B-202ENST00000639673 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
TRIM43B-202ENST00000639673 DCAF5Q96JK2 942 aa13.41□□□□□ -0.26
TRIM43B-202ENST00000639673 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
TRIM43B-202ENST00000639673 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
TRIM43B-202ENST00000639673 C4BP0C0L5 1744 aa13.4□□□□□ -0.26
TRIM43B-202ENST00000639673 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
TRIM43B-202ENST00000639673 ERVV-2B6SEH9 535 aa13.4□□□□□ -0.26
TRIM43B-202ENST00000639673 SIK1P57059 783 aa13.4□□□□□ -0.26
TRIM43B-202ENST00000639673 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
TRIM43B-202ENST00000639673 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
TRIM43B-202ENST00000639673 CABP4P57796 275 aa13.38□□□□□ -0.27
TRIM43B-202ENST00000639673 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
TRIM43B-202ENST00000639673 MSH5O43196 834 aa13.37□□□□□ -0.27
TRIM43B-202ENST00000639673 ITPK1Q13572 414 aa13.37□□□□□ -0.27
TRIM43B-202ENST00000639673 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms