RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 VAMP4O75379 141 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 FBLN1P23142 703 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 ARID3AQ99856 593 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 PPIP5K1Q6PFW1 1433 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 MYOM2P54296 1465 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 IL1RAPL2Q9NP60 686 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 CYP46A1Q9Y6A2 500 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 PLXNC1O60486 1568 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 TAF7Q15545 349 aaPredicted RBP10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 CPLX2Q6PUV4 134 aaKnown RBP10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 ERVK-7P63135 1459 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 TPM2P07951 284 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 AEBP1Q8IUX7 1158 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 KIF1BPQ96EK5 621 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 IQGAP3Q86VI3 1631 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 TRPM1Q7Z4N2 1603 aa10.32□□□□□ -0.76
HNRNPU-219ENST00000639628 F6X3S4 739 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 CDK11BP21127 795 aaKnown RBP10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 SSFA2P28290 1259 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 SASS6Q6UVJ0 657 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 RIMS2Q9UQ26 1411 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 ANKRD44Q8N8A2 993 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 ACEP12821 1306 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 TPM3P06753 285 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 C8orf58Q8NAV2 365 aa10.31□□□□□ -0.76
HNRNPU-219ENST00000639628 ZMYM3Q14202 1370 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 FIBPO43427 364 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 FLIIQ13045 1269 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 ANO8Q9HCE9 1232 aaPredicted RBP10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 NPATQ14207 1427 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 ANKRD1Q15327 319 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 CPLX1O14810 134 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 AMOTL2Q9Y2J4 779 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 PDIA4P13667 645 aaKnown RBP10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 CCDC73Q6ZRK6 1079 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 KCNH5Q8NCM2 988 aa10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 R3HCC1Q9Y3T6 440 aaKnown RBP10.3□□□□□ -0.76
HNRNPU-219ENST00000639628 UNC13BO14795 1591 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 GLRX3O76003 335 aaKnown RBP10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 NEUROD6Q96NK8 337 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 FAM13BQ9NYF5 915 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 MAP4K4O95819 1239 aaPredicted RBP10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 ATF3P18847 181 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 PHACTR3Q96KR7 559 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 TSPYL6Q8N831 410 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
HNRNPU-219ENST00000639628 TRDNQ13061 729 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 CWC27Q6UX04 472 aaKnown RBP10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 DCTPP1Q9H773 170 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 BAG4O95429 457 aaKnown RBP10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 KLHL40Q2TBA0 621 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 ZSCAN30Q86W11 494 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 LRRFIP2Q9Y608 721 aaKnown RBP10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 AACSQ86V21 672 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 TNRQ92752 1358 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 SHROOM2Q13796 1616 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 ZBTB7BO15156 539 aaPredicted RBP10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 ANKLE2Q86XL3 938 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 MAP7D2Q96T17 732 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 MEIS3Q99687 375 aa10.28□□□□□ -0.76
HNRNPU-219ENST00000639628 SDSP20132 328 aa10.27□□□□□ -0.76
HNRNPU-219ENST00000639628 EIF4A2Q14240 407 aaKnown RBP10.27□□□□□ -0.76
HNRNPU-219ENST00000639628 HSP90AB2PQ58FF8 381 aa10.27□□□□□ -0.76
HNRNPU-219ENST00000639628 MTERF4Q7Z6M4 381 aaKnown RBP10.27□□□□□ -0.76
HNRNPU-219ENST00000639628 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.76
HNRNPU-219ENST00000639628 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.76
HNRNPU-219ENST00000639628 EVA1CP58658 441 aa10.27□□□□□ -0.77
HNRNPU-219ENST00000639628 KRT85P78386 507 aa10.27□□□□□ -0.77
HNRNPU-219ENST00000639628 SYNE3Q6ZMZ3 975 aa10.27□□□□□ -0.77
HNRNPU-219ENST00000639628 RBM25P49756 843 aaKnown RBP10.27□□□□□ -0.77
HNRNPU-219ENST00000639628 JAKMIP1Q96N16 626 aaKnown RBP10.27□□□□□ -0.77
HNRNPU-219ENST00000639628 BLOC1S2Q6QNY1 142 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 TRIM29Q14134 588 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 AMOTQ4VCS5 1084 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 DNAAF4Q8WXU2 420 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 DNAJC2Q99543 621 aaKnown RBP10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 POLR1AO95602 1720 aaPredicted RBP10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 PIK3R4Q99570 1358 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 SYCE3A1L190 88 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 CCDC192P0DO97 292 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 RALYLQ86SE5 291 aaKnown RBP10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 TET3O43151 1660 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 LARP1BQ659C4 914 aaKnown RBP10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 ZRANB1Q9UGI0 708 aa10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 EDC4Q6P2E9 1401 aaKnown RBP10.26□□□□□ -0.77
HNRNPU-219ENST00000639628 XRCC6P12956 609 aaKnown RBP eCLIP10.25□□□□□ -0.77
HNRNPU-219ENST00000639628 SPG7Q9UQ90 795 aa10.25□□□□□ -0.77
HNRNPU-219ENST00000639628 PDE1AP54750 535 aa10.25□□□□□ -0.77
HNRNPU-219ENST00000639628 PROSER2Q86WR7 435 aaPredicted RBP10.25□□□□□ -0.77
HNRNPU-219ENST00000639628 SIL1Q9H173 461 aa10.25□□□□□ -0.77
HNRNPU-219ENST00000639628 ZCCHC11Q5TAX3 1644 aaKnown RBP10.25□□□□□ -0.77
HNRNPU-219ENST00000639628 KIF1BO60333 1816 aa10.25□□□□□ -0.77
HNRNPU-219ENST00000639628 APPP05067 770 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms