RNA–Protein interactions for RNA: ENST00000639347.1

RHOXF1P3-202, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 851 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-202ENST00000639347 RALBP1Q15311 655 aa16.02■□□□□ 0.16
RHOXF1P3-202ENST00000639347 PTF1AQ7RTS3 328 aa16.02■□□□□ 0.16
RHOXF1P3-202ENST00000639347 HMOX1P09601 288 aa16.01■□□□□ 0.15
RHOXF1P3-202ENST00000639347 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
RHOXF1P3-202ENST00000639347 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
RHOXF1P3-202ENST00000639347 U2SURPO15042 1029 aaKnown RBP15.99■□□□□ 0.15
RHOXF1P3-202ENST00000639347 TRIM37O94972 964 aa15.99■□□□□ 0.15
RHOXF1P3-202ENST00000639347 KDRP35968 1356 aa15.99■□□□□ 0.15
RHOXF1P3-202ENST00000639347 CYP27B1O15528 508 aa15.98■□□□□ 0.15
RHOXF1P3-202ENST00000639347 KCNQ2O43526 872 aa15.98■□□□□ 0.15
RHOXF1P3-202ENST00000639347 CFAP53Q96M91 514 aa15.98■□□□□ 0.15
RHOXF1P3-202ENST00000639347 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
RHOXF1P3-202ENST00000639347 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
RHOXF1P3-202ENST00000639347 DEFB132Q7Z7B7 95 aa15.96■□□□□ 0.15
RHOXF1P3-202ENST00000639347 PKD1L3Q7Z443 1732 aa15.95■□□□□ 0.14
RHOXF1P3-202ENST00000639347 CCDC184Q52MB2 194 aa15.95■□□□□ 0.14
RHOXF1P3-202ENST00000639347 BCL9O00512 1426 aa15.94■□□□□ 0.14
RHOXF1P3-202ENST00000639347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.14
RHOXF1P3-202ENST00000639347 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
RHOXF1P3-202ENST00000639347 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
RHOXF1P3-202ENST00000639347 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
RHOXF1P3-202ENST00000639347 PHKG2P15735 406 aa15.93■□□□□ 0.14
RHOXF1P3-202ENST00000639347 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.14
RHOXF1P3-202ENST00000639347 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
RHOXF1P3-202ENST00000639347 SPG7Q9UQ90 795 aa15.93■□□□□ 0.14
RHOXF1P3-202ENST00000639347 SBF2Q86WG5 1849 aa15.93■□□□□ 0.14
RHOXF1P3-202ENST00000639347 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
RHOXF1P3-202ENST00000639347 PRIM1P49642 420 aaKnown RBP15.92■□□□□ 0.14
RHOXF1P3-202ENST00000639347 CCDC125Q86Z20 511 aa15.92■□□□□ 0.14
RHOXF1P3-202ENST00000639347 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
RHOXF1P3-202ENST00000639347 APBA3O96018 575 aa15.91■□□□□ 0.14
RHOXF1P3-202ENST00000639347 PRKAR2BP31323 418 aa15.91■□□□□ 0.14
RHOXF1P3-202ENST00000639347 EN1Q05925 392 aaPredicted RBP15.91■□□□□ 0.14
RHOXF1P3-202ENST00000639347 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
RHOXF1P3-202ENST00000639347 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
RHOXF1P3-202ENST00000639347 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
RHOXF1P3-202ENST00000639347 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
RHOXF1P3-202ENST00000639347 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
RHOXF1P3-202ENST00000639347 ZNF530Q6P9A1 599 aaPredicted RBP15.9■□□□□ 0.14
RHOXF1P3-202ENST00000639347 IFNL2Q8IZJ0 200 aa15.9■□□□□ 0.14
RHOXF1P3-202ENST00000639347 ANP32CO43423 234 aa15.89■□□□□ 0.13
RHOXF1P3-202ENST00000639347 AMOTQ4VCS5 1084 aa15.89■□□□□ 0.13
RHOXF1P3-202ENST00000639347 SF3B2Q13435 895 aaKnown RBP15.88■□□□□ 0.13
RHOXF1P3-202ENST00000639347 EZH2Q15910 746 aaKnown RBP15.88■□□□□ 0.13
RHOXF1P3-202ENST00000639347 SYTL4Q96C24 671 aaPredicted RBP15.88■□□□□ 0.13
RHOXF1P3-202ENST00000639347 NHSQ6T4R5 1651 aa15.88■□□□□ 0.13
RHOXF1P3-202ENST00000639347 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
RHOXF1P3-202ENST00000639347 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
RHOXF1P3-202ENST00000639347 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
RHOXF1P3-202ENST00000639347 FCHSD2O94868 740 aa15.87■□□□□ 0.13
RHOXF1P3-202ENST00000639347 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
RHOXF1P3-202ENST00000639347 CAMKK2Q96RR4 588 aa15.87■□□□□ 0.13
RHOXF1P3-202ENST00000639347 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
RHOXF1P3-202ENST00000639347 BAG6P46379 1132 aa15.86■□□□□ 0.13
RHOXF1P3-202ENST00000639347 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
RHOXF1P3-202ENST00000639347 KAT6BQ8WYB5 2073 aa15.85■□□□□ 0.13
RHOXF1P3-202ENST00000639347 PROM2Q8N271 834 aa15.85■□□□□ 0.13
RHOXF1P3-202ENST00000639347 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
RHOXF1P3-202ENST00000639347 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
RHOXF1P3-202ENST00000639347 PIGBQ92521 554 aa15.84■□□□□ 0.13
RHOXF1P3-202ENST00000639347 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
RHOXF1P3-202ENST00000639347 BTAF1O14981 1849 aa15.84■□□□□ 0.13
RHOXF1P3-202ENST00000639347 PLSCR1O15162 318 aa15.83■□□□□ 0.12
RHOXF1P3-202ENST00000639347 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
RHOXF1P3-202ENST00000639347 DCAF5Q96JK2 942 aa15.83■□□□□ 0.12
RHOXF1P3-202ENST00000639347 ITGB4P16144 1822 aa15.81■□□□□ 0.12
RHOXF1P3-202ENST00000639347 KCNQ4P56696 695 aa15.81■□□□□ 0.12
RHOXF1P3-202ENST00000639347 CCDC146Q8IYE0 955 aa15.81■□□□□ 0.12
RHOXF1P3-202ENST00000639347 IL17REQ8NFR9 667 aa15.81■□□□□ 0.12
RHOXF1P3-202ENST00000639347 RNMTO43148 476 aaKnown RBP15.8■□□□□ 0.12
RHOXF1P3-202ENST00000639347 HSP90AB1P08238 724 aaKnown RBP15.8■□□□□ 0.12
RHOXF1P3-202ENST00000639347 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
RHOXF1P3-202ENST00000639347 MAP3K5Q99683 1374 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 GNAT3A8MTJ3 354 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 ERVV-2B6SEH9 535 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 NFATC2IPQ8NCF5 419 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 PNISRQ8TF01 805 aaKnown RBP15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 MRS2Q9HD23 443 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 LRRC4BQ9NT99 713 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 TMOD3Q9NYL9 352 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 ASAP1Q9ULH1 1129 aa15.79■□□□□ 0.12
RHOXF1P3-202ENST00000639347 CABP4P57796 275 aa15.78■□□□□ 0.12
RHOXF1P3-202ENST00000639347 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
RHOXF1P3-202ENST00000639347 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
RHOXF1P3-202ENST00000639347 ATG3Q9NT62 314 aa15.77■□□□□ 0.12
RHOXF1P3-202ENST00000639347 SCN11AQ9UI33 1791 aa15.77■□□□□ 0.11
RHOXF1P3-202ENST00000639347 RREB1Q92766 1687 aa15.76■□□□□ 0.11
RHOXF1P3-202ENST00000639347 ADAMTS7Q9UKP4 1686 aa15.76■□□□□ 0.11
RHOXF1P3-202ENST00000639347 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
RHOXF1P3-202ENST00000639347 MCM10Q7L590 875 aa15.76■□□□□ 0.11
RHOXF1P3-202ENST00000639347 SLC52A2Q9HAB3 445 aa15.76■□□□□ 0.11
RHOXF1P3-202ENST00000639347 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
RHOXF1P3-202ENST00000639347 PALLDQ8WX93 1383 aa15.75■□□□□ 0.11
RHOXF1P3-202ENST00000639347 NFE2L2Q16236 605 aa15.75■□□□□ 0.11
RHOXF1P3-202ENST00000639347 ANO8Q9HCE9 1232 aaPredicted RBP15.75■□□□□ 0.11
RHOXF1P3-202ENST00000639347 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
RHOXF1P3-202ENST00000639347 MAPK8IP3Q9UPT6 1336 aa15.74■□□□□ 0.11
RHOXF1P3-202ENST00000639347 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms