RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 REM2Q8IYK8 340 aaPredicted RBP5.75□□□□□ -1.49
CCDC7-213ENST00000639290 TMEM88BA6NKF7 163 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 ECE1P42892 770 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 TGFB2P61812 414 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 C9orf131Q5VYM1 1079 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 PHF8Q9UPP1 1060 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 ABCC6O95255 1503 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 BTAF1O14981 1849 aa5.74□□□□□ -1.49
CCDC7-213ENST00000639290 UTRNP46939 3433 aa5.74□□□□□ -1.49
CCDC7-213ENST00000639290 WDR33Q9C0J8 1336 aaKnown RBP5.74□□□□□ -1.49
CCDC7-213ENST00000639290 NSD3Q9BZ95 1437 aa5.74□□□□□ -1.49
CCDC7-213ENST00000639290 BRCA1P38398 1863 aaKnown RBP5.74□□□□□ -1.49
CCDC7-213ENST00000639290 MAP2K2P36507 400 aa5.73□□□□□ -1.49
CCDC7-213ENST00000639290 COL25A1Q9BXS0 654 aaPredicted RBP5.73□□□□□ -1.49
CCDC7-213ENST00000639290 LY75O60449 1722 aa5.73□□□□□ -1.49
CCDC7-213ENST00000639290 COL9A1P20849 921 aa5.73□□□□□ -1.49
CCDC7-213ENST00000639290 SOX10P56693 466 aa5.73□□□□□ -1.49
CCDC7-213ENST00000639290 EVA1CP58658 441 aa5.73□□□□□ -1.49
CCDC7-213ENST00000639290 GLTPD2A6NH11 291 aa5.72□□□□□ -1.49
CCDC7-213ENST00000639290 EIF3AQ14152 1382 aaKnown RBP5.72□□□□□ -1.49
CCDC7-213ENST00000639290 DEFB115Q30KQ5 88 aa5.72□□□□□ -1.49
CCDC7-213ENST00000639290 ANKRD13DQ6ZTN6 518 aa5.72□□□□□ -1.49
CCDC7-213ENST00000639290 SIRT1Q96EB6 747 aa5.72□□□□□ -1.49
CCDC7-213ENST00000639290 TFCP2L1Q9NZI6 479 aa5.72□□□□□ -1.49
CCDC7-213ENST00000639290 COL5A2P05997 1499 aaPredicted RBP5.71□□□□□ -1.49
CCDC7-213ENST00000639290 GPRASP1Q5JY77 1395 aa5.71□□□□□ -1.49
CCDC7-213ENST00000639290 SLIT3O75094 1523 aa5.71□□□□□ -1.5
CCDC7-213ENST00000639290 GPR153Q6NV75 609 aa5.71□□□□□ -1.5
CCDC7-213ENST00000639290 MYOM3Q5VTT5 1437 aa5.71□□□□□ -1.5
CCDC7-213ENST00000639290 SBF1O95248 1867 aa5.71□□□□□ -1.5
CCDC7-213ENST00000639290 PKN2Q16513 984 aaKnown RBP5.71□□□□□ -1.5
CCDC7-213ENST00000639290 RBBP6Q7Z6E9 1792 aaKnown RBP5.71□□□□□ -1.5
CCDC7-213ENST00000639290 ARHGAP27Q6ZUM4 889 aa5.7□□□□□ -1.5
CCDC7-213ENST00000639290 MARCH10Q8NA82 808 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-213ENST00000639290 STRN4Q9NRL3 753 aa5.7□□□□□ -1.5
CCDC7-213ENST00000639290 ITSN1Q15811 1721 aa5.7□□□□□ -1.5
CCDC7-213ENST00000639290 TIAM2Q8IVF5 1701 aa5.69□□□□□ -1.5
CCDC7-213ENST00000639290 ERBB4Q15303 1308 aa5.69□□□□□ -1.5
CCDC7-213ENST00000639290 A0A1W2PPC1 479 aa5.69□□□□□ -1.5
CCDC7-213ENST00000639290 PITPNM1O00562 1244 aa5.69□□□□□ -1.5
CCDC7-213ENST00000639290 RANGAP1P46060 587 aaPredicted RBP5.69□□□□□ -1.5
CCDC7-213ENST00000639290 SAGE1Q9NXZ1 904 aa5.69□□□□□ -1.5
CCDC7-213ENST00000639290 E9PCH4 1651 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 BRPF1P55201 1214 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-213ENST00000639290 LARP1Q6PKG0 1096 aaKnown RBP5.68□□□□□ -1.5
CCDC7-213ENST00000639290 PTF1AQ7RTS3 328 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 LDHDQ86WU2 507 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 PRR36Q9H6K5 1346 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 PPLO60437 1756 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 DCAF5Q96JK2 942 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 LRRC4BQ9NT99 713 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 RNF181Q9P0P0 153 aa5.68□□□□□ -1.5
CCDC7-213ENST00000639290 INSRP06213 1382 aa5.67□□□□□ -1.5
CCDC7-213ENST00000639290 ABCC11Q96J66 1382 aa5.67□□□□□ -1.5
CCDC7-213ENST00000639290 SCN4AP35499 1836 aa5.67□□□□□ -1.5
CCDC7-213ENST00000639290 LMOD2Q6P5Q4 547 aa5.67□□□□□ -1.5
CCDC7-213ENST00000639290 COL23A1Q86Y22 540 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-213ENST00000639290 HHIPL1Q96JK4 782 aa5.67□□□□□ -1.5
CCDC7-213ENST00000639290 STXBP5LQ9Y2K9 1186 aa5.67□□□□□ -1.5
CCDC7-213ENST00000639290 RGPD8O14715 1765 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-213ENST00000639290 ADAMTSL1Q8N6G6 1762 aa5.66□□□□□ -1.5
CCDC7-213ENST00000639290 MKRN4PQ13434 485 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-213ENST00000639290 PIP4P2Q8N4L2 257 aa5.66□□□□□ -1.5
CCDC7-213ENST00000639290 SPDYE1Q8NFV5 336 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-213ENST00000639290 ZNF692Q9BU19 519 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-213ENST00000639290 FOXK2Q01167 660 aa5.66□□□□□ -1.5
CCDC7-213ENST00000639290 HIRIP3Q9BW71 556 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-213ENST00000639290 CTU1Q7Z7A3 348 aaKnown RBP5.65□□□□□ -1.5
CCDC7-213ENST00000639290 SYMPKQ92797 1274 aaKnown RBP5.65□□□□□ -1.5
CCDC7-213ENST00000639290 USP35Q9P2H5 1018 aa5.65□□□□□ -1.5
CCDC7-213ENST00000639290 COLQQ9Y215 455 aaPredicted RBP5.65□□□□□ -1.5
CCDC7-213ENST00000639290 CCDC7Q96M83 1385 aa5.65□□□□□ -1.51
CCDC7-213ENST00000639290 RPGRIP1LQ68CZ1 1315 aa5.65□□□□□ -1.51
CCDC7-213ENST00000639290 BCS1LQ9Y276 419 aa5.65□□□□□ -1.51
CCDC7-213ENST00000639290 SSUH2Q9Y2M2 353 aa5.65□□□□□ -1.51
CCDC7-213ENST00000639290 LAMB4A4D0S4 1761 aa5.64□□□□□ -1.51
CCDC7-213ENST00000639290 C5P01031 1676 aa5.64□□□□□ -1.51
CCDC7-213ENST00000639290 ANKRD30AQ9BXX3 1397 aa5.64□□□□□ -1.51
CCDC7-213ENST00000639290 ACIN1Q9UKV3 1341 aaKnown RBP5.64□□□□□ -1.51
CCDC7-213ENST00000639290 VGFO15240 615 aaPredicted RBP5.64□□□□□ -1.51
CCDC7-213ENST00000639290 FXR2P51116 673 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC7-213ENST00000639290 DPY19L2Q6NUT2 758 aa5.64□□□□□ -1.51
CCDC7-213ENST00000639290 CUL9Q8IWT3 2517 aa5.64□□□□□ -1.51
CCDC7-213ENST00000639290 IQCA1LA6NCM1 817 aa5.64□□□□□ -1.51
CCDC7-213ENST00000639290 CAPNS2Q96L46 248 aa5.64□□□□□ -1.51
CCDC7-213ENST00000639290 POTECB2RU33 542 aa5.63□□□□□ -1.51
CCDC7-213ENST00000639290 EXOC5O00471 708 aa5.63□□□□□ -1.51
CCDC7-213ENST00000639290 ITGBL1O95965 494 aaPredicted RBP5.63□□□□□ -1.51
CCDC7-213ENST00000639290 LMNB1P20700 586 aa5.63□□□□□ -1.51
CCDC7-213ENST00000639290 OTUD5Q96G74 571 aa5.63□□□□□ -1.51
CCDC7-213ENST00000639290 GPR101Q96P66 508 aaPredicted RBP5.63□□□□□ -1.51
CCDC7-213ENST00000639290 N4BP2Q86UW6 1770 aaPredicted RBP5.63□□□□□ -1.51
CCDC7-213ENST00000639290 FCHSD2O94868 740 aa5.63□□□□□ -1.51
CCDC7-213ENST00000639290 P2RX7Q99572 595 aaKnown RBP5.63□□□□□ -1.51
CCDC7-213ENST00000639290 SUPT5HO00267 1087 aaKnown RBP5.62□□□□□ -1.51
CCDC7-213ENST00000639290 INTS3Q68E01 1043 aaKnown RBP5.62□□□□□ -1.51
CCDC7-213ENST00000639290 LHX8Q68G74 356 aa5.62□□□□□ -1.51
CCDC7-213ENST00000639290 DICER1Q9UPY3 1922 aaKnown RBP5.62□□□□□ -1.51
CCDC7-213ENST00000639290 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.62□□□□□ -1.51
CCDC7-213ENST00000639290 HPS5Q9UPZ3 1129 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms