RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 RGS3P49796 1198 aa10.64□□□□□ -0.71
NECAP1-214ENST00000639038 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
NECAP1-214ENST00000639038 C19orf44Q9H6X5 657 aa10.64□□□□□ -0.71
NECAP1-214ENST00000639038 KNSTRNQ9Y448 316 aa10.64□□□□□ -0.71
NECAP1-214ENST00000639038 XIRP1Q702N8 1843 aaKnown RBP10.63□□□□□ -0.71
NECAP1-214ENST00000639038 DCCP43146 1447 aa10.63□□□□□ -0.71
NECAP1-214ENST00000639038 ARMCX6Q7L4S7 300 aa10.63□□□□□ -0.71
NECAP1-214ENST00000639038 PRKRIP1Q9H875 184 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-214ENST00000639038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
NECAP1-214ENST00000639038 A0A1W2PP64 1363 aa10.63□□□□□ -0.71
NECAP1-214ENST00000639038 KTN1Q86UP2 1357 aaKnown RBP10.63□□□□□ -0.71
NECAP1-214ENST00000639038 CPSF1Q10570 1443 aaKnown RBP10.63□□□□□ -0.71
NECAP1-214ENST00000639038 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-214ENST00000639038 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
NECAP1-214ENST00000639038 RGPD8O14715 1765 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-214ENST00000639038 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
NECAP1-214ENST00000639038 KRBA2Q6ZNG9 492 aa10.62□□□□□ -0.71
NECAP1-214ENST00000639038 NSD3Q9BZ95 1437 aa10.61□□□□□ -0.71
NECAP1-214ENST00000639038 OTUD6BQ8N6M0 293 aa10.61□□□□□ -0.71
NECAP1-214ENST00000639038 PPFIA4O75335 1185 aa10.6□□□□□ -0.71
NECAP1-214ENST00000639038 POLD1P28340 1107 aa10.6□□□□□ -0.71
NECAP1-214ENST00000639038 MON2Q7Z3U7 1717 aa10.6□□□□□ -0.71
NECAP1-214ENST00000639038 POLR3AO14802 1390 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-214ENST00000639038 PARD3Q8TEW0 1356 aa10.6□□□□□ -0.71
NECAP1-214ENST00000639038 NUTM2FA1L443 756 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 PEX14O75381 377 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 MSH6P52701 1360 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 LTBP4Q8N2S1 1624 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 EDC4Q6P2E9 1401 aaKnown RBP10.59□□□□□ -0.71
NECAP1-214ENST00000639038 ACEP12821 1306 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 CGNL1Q0VF96 1302 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 IRF6O14896 467 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 ATF3P18847 181 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 NBPF9Q3BBW0 867 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 LONRF3Q496Y0 759 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 TSPAN18Q96SJ8 248 aa10.59□□□□□ -0.71
NECAP1-214ENST00000639038 NSD2O96028 1365 aa10.58□□□□□ -0.72
NECAP1-214ENST00000639038 CADPS2Q86UW7 1296 aa10.58□□□□□ -0.72
NECAP1-214ENST00000639038 C1orf167Q5SNV9 1468 aa10.58□□□□□ -0.72
NECAP1-214ENST00000639038 MST1RQ04912 1400 aa10.58□□□□□ -0.72
NECAP1-214ENST00000639038 SSFA2P28290 1259 aa10.58□□□□□ -0.72
NECAP1-214ENST00000639038 MPNDQ8N594 471 aa10.58□□□□□ -0.72
NECAP1-214ENST00000639038 NRDCO43847 1150 aa10.57□□□□□ -0.72
NECAP1-214ENST00000639038 ARID4AP29374 1257 aaPredicted RBP10.57□□□□□ -0.72
NECAP1-214ENST00000639038 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
NECAP1-214ENST00000639038 CLUAP1Q96AJ1 413 aa10.57□□□□□ -0.72
NECAP1-214ENST00000639038 STK24Q9Y6E0 443 aa10.57□□□□□ -0.72
NECAP1-214ENST00000639038 USP6P35125 1406 aa10.57□□□□□ -0.72
NECAP1-214ENST00000639038 SSH2Q76I76 1423 aa10.57□□□□□ -0.72
NECAP1-214ENST00000639038 NRKQ7Z2Y5 1582 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 TRAK2O60296 914 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 MCCD1P59942 119 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-214ENST00000639038 PMFBP1Q8TBY8 1022 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 KIF20BQ96Q89 1820 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-214ENST00000639038 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
NECAP1-214ENST00000639038 ANKRD26Q9UPS8 1709 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 KIF1AQ12756 1690 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 RAB11FIP3O75154 756 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 ZNF662Q6ZS27 426 aa10.56□□□□□ -0.72
NECAP1-214ENST00000639038 NGDNQ8NEJ9 315 aaKnown RBP10.56□□□□□ -0.72
NECAP1-214ENST00000639038 GOLIM4O00461 696 aa10.55□□□□□ -0.72
NECAP1-214ENST00000639038 TCERG1O14776 1098 aaKnown RBP10.55□□□□□ -0.72
NECAP1-214ENST00000639038 FYB1O15117 783 aa10.55□□□□□ -0.72
NECAP1-214ENST00000639038 FOSBP53539 338 aa10.55□□□□□ -0.72
NECAP1-214ENST00000639038 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
NECAP1-214ENST00000639038 MAP4K4O95819 1239 aaPredicted RBP10.55□□□□□ -0.72
NECAP1-214ENST00000639038 CALRP27797 417 aaKnown RBP10.55□□□□□ -0.72
NECAP1-214ENST00000639038 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
NECAP1-214ENST00000639038 UBA5Q9GZZ9 404 aa10.54□□□□□ -0.72
NECAP1-214ENST00000639038 TTC21AQ8NDW8 1320 aa10.54□□□□□ -0.72
NECAP1-214ENST00000639038 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
NECAP1-214ENST00000639038 ORAI2Q96SN7 254 aa10.54□□□□□ -0.72
NECAP1-214ENST00000639038 PNMA2Q9UL42 364 aa10.54□□□□□ -0.72
NECAP1-214ENST00000639038 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
NECAP1-214ENST00000639038 MORC1Q86VD1 984 aa10.53□□□□□ -0.72
NECAP1-214ENST00000639038 NLRP13Q86W25 1043 aa10.53□□□□□ -0.72
NECAP1-214ENST00000639038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.53□□□□□ -0.72
NECAP1-214ENST00000639038 MORC4Q8TE76 937 aa10.53□□□□□ -0.72
NECAP1-214ENST00000639038 ARHGEF1Q92888 912 aaKnown RBP10.53□□□□□ -0.72
NECAP1-214ENST00000639038 PPP2R1AP30153 589 aa10.52□□□□□ -0.73
NECAP1-214ENST00000639038 ZFYVE27Q5T4F4 411 aa10.52□□□□□ -0.73
NECAP1-214ENST00000639038 GGNBP2Q9H3C7 697 aa10.52□□□□□ -0.73
NECAP1-214ENST00000639038 DHX16O60231 1041 aaKnown RBP10.52□□□□□ -0.73
NECAP1-214ENST00000639038 RHBDL3P58872 404 aa10.52□□□□□ -0.73
NECAP1-214ENST00000639038 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
NECAP1-214ENST00000639038 GOLGA6CA6NDK9 693 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 GOLGA6BA6NDN3 693 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 GOLGA6DP0CG33 693 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 DNAJC14Q6Y2X3 702 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-214ENST00000639038 NME9Q86XW9 330 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 GOLGA6AQ9NYA3 693 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 USP31Q70CQ4 1352 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 USP54Q70EL1 1684 aa10.51□□□□□ -0.73
NECAP1-214ENST00000639038 KIF4AO95239 1232 aa10.5□□□□□ -0.73
NECAP1-214ENST00000639038 PSME1Q06323 249 aa10.5□□□□□ -0.73
NECAP1-214ENST00000639038 HDAC1Q13547 482 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-214ENST00000639038 SETDB1Q15047 1291 aa10.5□□□□□ -0.73
NECAP1-214ENST00000639038 CCDC184Q52MB2 194 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms