RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PTPRTO14522 1441 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 FAM177BA6PVY3 158 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-221ENST00000638141 TTC12Q9H892 705 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-221ENST00000638141 EFCC1Q9HA90 598 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-221ENST00000638141 KIF18AQ8NI77 898 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 ZNF428Q96B54 188 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 CARD14Q9BXL6 1004 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 LNPKQ9C0E8 428 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 NSD2O96028 1365 aa14.54□□□□□ -0.08
CAPN3-221ENST00000638141 SMTNL1A8MU46 457 aa14.53□□□□□ -0.08
CAPN3-221ENST00000638141 ADCY5O95622 1261 aa14.53□□□□□ -0.08
CAPN3-221ENST00000638141 ALDH1L2Q3SY69 923 aa14.53□□□□□ -0.08
CAPN3-221ENST00000638141 ST18O60284 1047 aa14.53□□□□□ -0.08
CAPN3-221ENST00000638141 MLECQ14165 292 aa14.53□□□□□ -0.08
CAPN3-221ENST00000638141 C14orf37Q86TY3 774 aa14.53□□□□□ -0.08
CAPN3-221ENST00000638141 USP25Q9UHP3 1055 aa14.52□□□□□ -0.08
CAPN3-221ENST00000638141 MMP14P50281 582 aa14.52□□□□□ -0.09
CAPN3-221ENST00000638141 PIK3R4Q99570 1358 aa14.52□□□□□ -0.09
CAPN3-221ENST00000638141 KIF3BO15066 747 aa14.51□□□□□ -0.09
CAPN3-221ENST00000638141 ATAD2Q6PL18 1390 aa14.51□□□□□ -0.09
CAPN3-221ENST00000638141 BRD1O95696 1058 aa14.51□□□□□ -0.09
CAPN3-221ENST00000638141 MORC1Q86VD1 984 aa14.51□□□□□ -0.09
CAPN3-221ENST00000638141 KDM4AO75164 1064 aa14.5□□□□□ -0.09
CAPN3-221ENST00000638141 C17orf53Q8N3J3 647 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-221ENST00000638141 TMEM57Q8N5G2 664 aa14.5□□□□□ -0.09
CAPN3-221ENST00000638141 GEMIN8Q9NWZ8 242 aaKnown RBP14.5□□□□□ -0.09
CAPN3-221ENST00000638141 ZC3H13Q5T200 1668 aaKnown RBP14.5□□□□□ -0.09
CAPN3-221ENST00000638141 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-221ENST00000638141 SSH1Q8WYL5 1049 aa14.49□□□□□ -0.09
CAPN3-221ENST00000638141 USP26Q9BXU7 913 aa14.49□□□□□ -0.09
CAPN3-221ENST00000638141 RRP7AQ9Y3A4 280 aaKnown RBP14.49□□□□□ -0.09
CAPN3-221ENST00000638141 NSD3Q9BZ95 1437 aa14.49□□□□□ -0.09
CAPN3-221ENST00000638141 GOLGA6L6A8MZA4 724 aa14.49□□□□□ -0.09
CAPN3-221ENST00000638141 GGT6Q6P531 493 aa14.49□□□□□ -0.09
CAPN3-221ENST00000638141 PAXBP1Q9Y5B6 917 aa14.49□□□□□ -0.09
CAPN3-221ENST00000638141 SETBP1Q9Y6X0 1596 aa14.49□□□□□ -0.09
CAPN3-221ENST00000638141 NEUROD2Q15784 382 aa14.48□□□□□ -0.09
CAPN3-221ENST00000638141 SLFNL1Q499Z3 407 aa14.48□□□□□ -0.09
CAPN3-221ENST00000638141 TMEM87AQ8NBN3 555 aa14.48□□□□□ -0.09
CAPN3-221ENST00000638141 ZNF397Q8NF99 534 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-221ENST00000638141 ZGPATQ8N5A5 531 aaKnown RBP14.48□□□□□ -0.09
CAPN3-221ENST00000638141 KCNF1Q9H3M0 494 aa14.48□□□□□ -0.09
CAPN3-221ENST00000638141 FEZ2Q9UHY8 353 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-221ENST00000638141 AGLP35573 1532 aa14.47□□□□□ -0.09
CAPN3-221ENST00000638141 TRIM6-TRIM34B2RNG4 842 aa14.47□□□□□ -0.09
CAPN3-221ENST00000638141 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
CAPN3-221ENST00000638141 NOB1Q9ULX3 412 aaKnown RBP14.47□□□□□ -0.09
CAPN3-221ENST00000638141 PPIP5K1Q6PFW1 1433 aa14.47□□□□□ -0.09
CAPN3-221ENST00000638141 EXOSC9Q06265 439 aaKnown RBP14.47□□□□□ -0.09
CAPN3-221ENST00000638141 CCDC183Q5T5S1 534 aa14.47□□□□□ -0.09
CAPN3-221ENST00000638141 PYCARDQ9ULZ3 195 aa14.47□□□□□ -0.09
CAPN3-221ENST00000638141 TET3O43151 1660 aa14.47□□□□□ -0.09
CAPN3-221ENST00000638141 CYP2C19P33261 490 aa14.46□□□□□ -0.09
CAPN3-221ENST00000638141 MCM2P49736 904 aa14.46□□□□□ -0.09
CAPN3-221ENST00000638141 ARHGAP45Q92619 1136 aa14.46□□□□□ -0.09
CAPN3-221ENST00000638141 IFT172Q9UG01 1749 aa14.46□□□□□ -0.09
CAPN3-221ENST00000638141 PTCH1Q13635 1447 aa14.46□□□□□ -0.09
CAPN3-221ENST00000638141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.1
CAPN3-221ENST00000638141 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.1
CAPN3-221ENST00000638141 INTS3Q68E01 1043 aaKnown RBP14.45□□□□□ -0.1
CAPN3-221ENST00000638141 INTS4Q96HW7 963 aaKnown RBP14.45□□□□□ -0.1
CAPN3-221ENST00000638141 PUS7Q96PZ0 661 aaKnown RBP14.45□□□□□ -0.1
CAPN3-221ENST00000638141 DEPDC5O75140 1603 aa14.45□□□□□ -0.1
CAPN3-221ENST00000638141 REC8O95072 547 aa14.45□□□□□ -0.1
CAPN3-221ENST00000638141 CUL4AQ13619 759 aa14.45□□□□□ -0.1
CAPN3-221ENST00000638141 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
CAPN3-221ENST00000638141 CTR9Q6PD62 1173 aa14.45□□□□□ -0.1
CAPN3-221ENST00000638141 SECISBP2LQ93073 1101 aaKnown RBP14.45□□□□□ -0.1
CAPN3-221ENST00000638141 KIF1BPQ96EK5 621 aa14.45□□□□□ -0.1
CAPN3-221ENST00000638141 NRXN1Q9ULB1 1477 aa14.45□□□□□ -0.1
CAPN3-221ENST00000638141 CFAP65Q6ZU64 1925 aaKnown RBP14.44□□□□□ -0.1
CAPN3-221ENST00000638141 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
CAPN3-221ENST00000638141 BRD2P25440 801 aaKnown RBP14.44□□□□□ -0.1
CAPN3-221ENST00000638141 CASC1Q6TDU7 716 aa14.44□□□□□ -0.1
CAPN3-221ENST00000638141 MX1P20591 662 aa14.43□□□□□ -0.1
CAPN3-221ENST00000638141 MUM1L1Q5H9M0 696 aa14.43□□□□□ -0.1
CAPN3-221ENST00000638141 RAD50Q92878 1312 aa14.43□□□□□ -0.1
CAPN3-221ENST00000638141 FUCA2Q9BTY2 467 aa14.42□□□□□ -0.1
CAPN3-221ENST00000638141 CCDC112Q8NEF3 446 aa14.42□□□□□ -0.1
CAPN3-221ENST00000638141 TCHHQ07283 1943 aa14.42□□□□□ -0.1
CAPN3-221ENST00000638141 KDM4FA0A1W2PPD8 638 aa14.41□□□□□ -0.1
CAPN3-221ENST00000638141 GSPT1P15170 499 aaKnown RBP14.41□□□□□ -0.1
CAPN3-221ENST00000638141 RNF20Q5VTR2 975 aa14.41□□□□□ -0.1
CAPN3-221ENST00000638141 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-221ENST00000638141 MROH1Q8NDA8 1641 aa14.41□□□□□ -0.1
CAPN3-221ENST00000638141 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-221ENST00000638141 TTC22Q5TAA0 569 aa14.41□□□□□ -0.1
CAPN3-221ENST00000638141 MTHFSP49914 203 aa14.4□□□□□ -0.1
CAPN3-221ENST00000638141 CHMP4AQ9BY43 222 aa14.4□□□□□ -0.1
CAPN3-221ENST00000638141 HCLS1P14317 486 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-221ENST00000638141 RAD51AP2Q09MP3 1159 aa14.4□□□□□ -0.1
CAPN3-221ENST00000638141 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.1
CAPN3-221ENST00000638141 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
CAPN3-221ENST00000638141 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
CAPN3-221ENST00000638141 HNRNPH2P55795 449 aaKnown RBP14.39□□□□□ -0.11
CAPN3-221ENST00000638141 KMT5BQ4FZB7 885 aa14.39□□□□□ -0.11
CAPN3-221ENST00000638141 QRICH2Q9H0J4 1663 aa14.39□□□□□ -0.11
CAPN3-221ENST00000638141 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms