RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 PLSCR1O15162 318 aa16.55■□□□□ 0.24
EFHC1-239ENST00000638140 MTHFSP49914 203 aa16.55■□□□□ 0.24
EFHC1-239ENST00000638140 RGPD1P0DJD0 1748 aa16.55■□□□□ 0.24
EFHC1-239ENST00000638140 MEGF6O75095 1541 aa16.55■□□□□ 0.24
EFHC1-239ENST00000638140 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
EFHC1-239ENST00000638140 PROM2Q8N271 834 aa16.53■□□□□ 0.24
EFHC1-239ENST00000638140 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
EFHC1-239ENST00000638140 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.24
EFHC1-239ENST00000638140 TNS1Q9HBL0 1735 aaKnown RBP16.52■□□□□ 0.24
EFHC1-239ENST00000638140 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
EFHC1-239ENST00000638140 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
EFHC1-239ENST00000638140 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
EFHC1-239ENST00000638140 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
EFHC1-239ENST00000638140 CYP27B1O15528 508 aa16.5■□□□□ 0.23
EFHC1-239ENST00000638140 IL13P35225 146 aa16.5■□□□□ 0.23
EFHC1-239ENST00000638140 R3HDM1Q15032 1099 aaKnown RBP16.5■□□□□ 0.23
EFHC1-239ENST00000638140 SPG7Q9UQ90 795 aa16.5■□□□□ 0.23
EFHC1-239ENST00000638140 IGSF1Q8N6C5 1336 aa16.49■□□□□ 0.23
EFHC1-239ENST00000638140 SBF2Q86WG5 1849 aa16.49■□□□□ 0.23
EFHC1-239ENST00000638140 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
EFHC1-239ENST00000638140 NCAPD2Q15021 1401 aa16.48■□□□□ 0.23
EFHC1-239ENST00000638140 TXNRD1Q16881 649 aa16.48■□□□□ 0.23
EFHC1-239ENST00000638140 NBPF14Q5TI25 921 aa16.48■□□□□ 0.23
EFHC1-239ENST00000638140 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
EFHC1-239ENST00000638140 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
EFHC1-239ENST00000638140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.23
EFHC1-239ENST00000638140 ZEB1P37275 1124 aaPredicted RBP16.46■□□□□ 0.23
EFHC1-239ENST00000638140 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.23
EFHC1-239ENST00000638140 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
EFHC1-239ENST00000638140 DIAPH1O60610 1272 aaKnown RBP16.45■□□□□ 0.22
EFHC1-239ENST00000638140 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
EFHC1-239ENST00000638140 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
EFHC1-239ENST00000638140 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
EFHC1-239ENST00000638140 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
EFHC1-239ENST00000638140 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
EFHC1-239ENST00000638140 HMOX1P09601 288 aa16.42■□□□□ 0.22
EFHC1-239ENST00000638140 PHKG2P15735 406 aa16.42■□□□□ 0.22
EFHC1-239ENST00000638140 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
EFHC1-239ENST00000638140 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
EFHC1-239ENST00000638140 KCNQ4P56696 695 aa16.41■□□□□ 0.22
EFHC1-239ENST00000638140 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
EFHC1-239ENST00000638140 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
EFHC1-239ENST00000638140 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
EFHC1-239ENST00000638140 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
EFHC1-239ENST00000638140 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
EFHC1-239ENST00000638140 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
EFHC1-239ENST00000638140 ZNF530Q6P9A1 599 aaPredicted RBP16.39■□□□□ 0.21
EFHC1-239ENST00000638140 PIGBQ92521 554 aa16.39■□□□□ 0.21
EFHC1-239ENST00000638140 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
EFHC1-239ENST00000638140 KDRP35968 1356 aa16.38■□□□□ 0.21
EFHC1-239ENST00000638140 RREB1Q92766 1687 aa16.37■□□□□ 0.21
EFHC1-239ENST00000638140 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
EFHC1-239ENST00000638140 SLC27A3Q5K4L6 730 aa16.37■□□□□ 0.21
EFHC1-239ENST00000638140 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
EFHC1-239ENST00000638140 BTAF1O14981 1849 aa16.36■□□□□ 0.21
EFHC1-239ENST00000638140 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
EFHC1-239ENST00000638140 DCAF5Q96JK2 942 aa16.36■□□□□ 0.21
EFHC1-239ENST00000638140 PDGFDQ9GZP0 370 aaPredicted RBP16.36■□□□□ 0.21
EFHC1-239ENST00000638140 NUP188Q5SRE5 1749 aa16.36■□□□□ 0.21
EFHC1-239ENST00000638140 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
EFHC1-239ENST00000638140 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
EFHC1-239ENST00000638140 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
EFHC1-239ENST00000638140 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
EFHC1-239ENST00000638140 PLEKHG2Q9H7P9 1386 aa16.35■□□□□ 0.21
EFHC1-239ENST00000638140 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
EFHC1-239ENST00000638140 RGPD3A6NKT7 1758 aaPredicted RBP16.34■□□□□ 0.21
EFHC1-239ENST00000638140 RGPD4Q7Z3J3 1758 aa16.34■□□□□ 0.21
EFHC1-239ENST00000638140 ASAP1Q9ULH1 1129 aa16.34■□□□□ 0.21
EFHC1-239ENST00000638140 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
EFHC1-239ENST00000638140 ERVV-2B6SEH9 535 aa16.33■□□□□ 0.2
EFHC1-239ENST00000638140 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
EFHC1-239ENST00000638140 SMARCC1Q92922 1105 aaPredicted RBP16.33■□□□□ 0.2
EFHC1-239ENST00000638140 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
EFHC1-239ENST00000638140 CABP4P57796 275 aa16.32■□□□□ 0.2
EFHC1-239ENST00000638140 ZNF827Q17R98 1081 aa16.32■□□□□ 0.2
EFHC1-239ENST00000638140 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
EFHC1-239ENST00000638140 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
EFHC1-239ENST00000638140 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
EFHC1-239ENST00000638140 ATG3Q9NT62 314 aa16.32■□□□□ 0.2
EFHC1-239ENST00000638140 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
EFHC1-239ENST00000638140 U2AF1L5P0DN76 240 aaPredicted RBP16.31■□□□□ 0.2
EFHC1-239ENST00000638140 U2AF1Q01081 240 aaKnown RBP eCLIP16.31■□□□□ 0.2
EFHC1-239ENST00000638140 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
EFHC1-239ENST00000638140 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
EFHC1-239ENST00000638140 ZBTB7AO95365 584 aa16.29■□□□□ 0.2
EFHC1-239ENST00000638140 RALBP1Q15311 655 aa16.29■□□□□ 0.2
EFHC1-239ENST00000638140 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
EFHC1-239ENST00000638140 SPON1Q9HCB6 807 aa16.29■□□□□ 0.2
EFHC1-239ENST00000638140 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
EFHC1-239ENST00000638140 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
EFHC1-239ENST00000638140 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
EFHC1-239ENST00000638140 SIK1P57059 783 aa16.28■□□□□ 0.2
EFHC1-239ENST00000638140 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
EFHC1-239ENST00000638140 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
EFHC1-239ENST00000638140 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
EFHC1-239ENST00000638140 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
EFHC1-239ENST00000638140 FCHSD2O94868 740 aa16.27■□□□□ 0.2
EFHC1-239ENST00000638140 ITGB4P16144 1822 aa16.26■□□□□ 0.19
EFHC1-239ENST00000638140 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
EFHC1-239ENST00000638140 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms