RNA–Protein interactions for RNA: ENST00000638032.1

RYR3-231, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 100 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-231	ENST00000638032	USP21	Q9UK80	565 aa		7.77	□□□□□ -1.17
RYR3-231	ENST00000638032	PARP4	Q9UKK3	1724 aa	Known RBP	7.77	□□□□□ -1.17
RYR3-231	ENST00000638032	ATRN	O75882	1429 aa		7.77	□□□□□ -1.17
RYR3-231	ENST00000638032	AFF2	P51816	1311 aa		7.77	□□□□□ -1.17
RYR3-231	ENST00000638032	WNK3	Q9BYP7	1800 aa		7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	NEFM	P07197	916 aa		7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	IL2RB	P14784	551 aa		7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	MTHFSD	Q2M296	383 aa	Known RBP	7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	MEX3C	Q5U5Q3	659 aa	Known RBP	7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	GAS2L2	Q8NHY3	880 aa		7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	TRIM35	Q9UPQ4	493 aa		7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	ADAMTS7	Q9UKP4	1686 aa		7.76	□□□□□ -1.17
RYR3-231	ENST00000638032	TAT	P17735	454 aa	Predicted RBP	7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	RIPK4	P57078	832 aa		7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	NKX1-1	Q15270	411 aa	Predicted RBP	7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	AKAP4	Q5JQC9	854 aa		7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	WDR63	Q8IWG1	891 aa		7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	WWC1	Q8IX03	1113 aa		7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	GJD4	Q96KN9	370 aa	Predicted RBP	7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	TRPC5	Q9UL62	973 aa	Predicted RBP	7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	SPG7	Q9UQ90	795 aa		7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	SHANK3	Q9BYB0	1731 aa		7.75	□□□□□ -1.17
RYR3-231	ENST00000638032	DLG5	Q8TDM6	1919 aa		7.74	□□□□□ -1.17
RYR3-231	ENST00000638032	CEMIP	Q8WUJ3	1361 aa		7.74	□□□□□ -1.17
RYR3-231	ENST00000638032	LMOD3	Q0VAK6	560 aa		7.74	□□□□□ -1.17
RYR3-231	ENST00000638032	PDE3B	Q13370	1112 aa		7.74	□□□□□ -1.17
RYR3-231	ENST00000638032	ZNF772	Q68DY9	489 aa	Predicted RBP	7.74	□□□□□ -1.17
RYR3-231	ENST00000638032	GLI3	P10071	1580 aa		7.74	□□□□□ -1.17
RYR3-231	ENST00000638032	IL16	Q14005	1332 aa		7.74	□□□□□ -1.17
RYR3-231	ENST00000638032	THSD7A	Q9UPZ6	1657 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	MAP3K5	Q99683	1374 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	TNS2	Q63HR2	1409 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	GNAT3	A8MTJ3	354 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	CYP27B1	O15528	508 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	PHKG2	P15735	406 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	TRMT2A	Q8IZ69	625 aa	Known RBP	7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	IFNL2	Q8IZJ0	200 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	ZCRB1	Q8TBF4	217 aa	Known RBP	7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	QTRT2	Q9H974	415 aa	Known RBP	7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	PCDH11X	Q9BZA7	1347 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	PCDH11Y	Q9BZA8	1340 aa		7.73	□□□□□ -1.17
RYR3-231	ENST00000638032	BCL9	O00512	1426 aa		7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	LRRC37A3	O60309	1634 aa		7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	HSP90AB1	P08238	724 aa	Known RBP	7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	ZNF853	P0CG23	659 aa		7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	CALD1	Q05682	793 aa	Known RBP	7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	ILDR1	Q86SU0	546 aa	Predicted RBP	7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	IL17RE	Q8NFR9	667 aa		7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	BABAM1	Q9NWV8	329 aa		7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	USP35	Q9P2H5	1018 aa		7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	RGS17	Q9UGC6	210 aa	Predicted RBP	7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	RRP7A	Q9Y3A4	280 aa	Known RBP	7.72	□□□□□ -1.17
RYR3-231	ENST00000638032	MRC1	P22897	1456 aa		7.71	□□□□□ -1.18
RYR3-231	ENST00000638032	EXOC5	O00471	708 aa		7.71	□□□□□ -1.18
RYR3-231	ENST00000638032	GOLGA2	Q08379	1002 aa		7.71	□□□□□ -1.18
RYR3-231	ENST00000638032	NEUROD2	Q15784	382 aa		7.71	□□□□□ -1.18
RYR3-231	ENST00000638032	C1orf141	Q5JVX7	400 aa		7.71	□□□□□ -1.18
RYR3-231	ENST00000638032	DCAF5	Q96JK2	942 aa		7.71	□□□□□ -1.18
RYR3-231	ENST00000638032	SCN11A	Q9UI33	1791 aa		7.71	□□□□□ -1.18
RYR3-231	ENST00000638032	KDM6A	O15550	1401 aa	Predicted RBP	7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	ERVV-2	B6SEH9	535 aa		7.7	□□□□□ -1.18
RYR3-231	ENST00000638032		E9PSI1	815 aa		7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	RBM6	P78332	1123 aa	Known RBP	7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	SLFN5	Q08AF3	891 aa		7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	DDB1	Q16531	1140 aa		7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	FAM98C	Q17RN3	349 aa	Known RBP	7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	RTF1	Q92541	710 aa	Known RBP	7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	CFAP44	Q96MT7	982 aa		7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	YTHDC1	Q96MU7	727 aa	Known RBP	7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	IFT57	Q9NWB7	429 aa		7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	CCDC9	Q9Y3X0	531 aa	Known RBP	7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	EP400	Q96L91	3159 aa		7.7	□□□□□ -1.18
RYR3-231	ENST00000638032	SIPA1L3	O60292	1781 aa	Predicted RBP	7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	VIRMA	Q69YN4	1812 aa	Known RBP	7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	CHL1	O00533	1208 aa		7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	RNMT	O43148	476 aa	Known RBP	7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	DUSP27	Q5VZP5	1158 aa		7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	MCM10	Q7L590	875 aa		7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	MARCH10	Q8NA82	808 aa	Predicted RBP	7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	LGR6	Q9HBX8	967 aa		7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	SPINK5	Q9NQ38	1064 aa	Predicted RBP	7.69	□□□□□ -1.18
RYR3-231	ENST00000638032	GNAI1	P63096	354 aa		7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	DCTN1	Q14203	1278 aa		7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	TAF7	Q15545	349 aa	Predicted RBP	7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	MPRIP	Q6WCQ1	1025 aa		7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	SEPT12	Q8IYM1	358 aa		7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	CDCA7L	Q96GN5	454 aa		7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	SLC52A2	Q9HAB3	445 aa		7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	SALL2	Q9Y467	1007 aa	Predicted RBP	7.68	□□□□□ -1.18
RYR3-231	ENST00000638032	TOGARAM1	Q9Y4F4	1720 aa		7.67	□□□□□ -1.18
RYR3-231	ENST00000638032	SENP3-EIF4A1	A0A087X0R7	540 aa		7.67	□□□□□ -1.18
RYR3-231	ENST00000638032	RXRB	P28702	533 aa		7.67	□□□□□ -1.18
RYR3-231	ENST00000638032	POTEA	Q6S8J7	498 aa		7.67	□□□□□ -1.18
RYR3-231	ENST00000638032	DDX54	Q8TDD1	881 aa	Known RBP	7.67	□□□□□ -1.18
RYR3-231	ENST00000638032	THUMPD2	Q9BTF0	503 aa	Known RBP	7.67	□□□□□ -1.18
RYR3-231	ENST00000638032	MYH16	Q9H6N6	1097 aa		7.67	□□□□□ -1.18
RYR3-231	ENST00000638032	CT47B1	P0C2W7	299 aa	Predicted RBP	7.66	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms