RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-250ENST00000637809 ZCRB1Q8TBF4 217 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-250ENST00000637809 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
CACNA1A-250ENST00000637809 RRS1Q15050 365 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-250ENST00000637809 SLC16A10Q8TF71 515 aa17.06■□□□□ 0.32
CACNA1A-250ENST00000637809 SYTL4Q96C24 671 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-250ENST00000637809 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
CACNA1A-250ENST00000637809 TMF1P82094 1093 aa17.03■□□□□ 0.32
CACNA1A-250ENST00000637809 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
CACNA1A-250ENST00000637809 TFCP2L1Q9NZI6 479 aa17.03■□□□□ 0.32
CACNA1A-250ENST00000637809 USP47Q96K76 1375 aa17.02■□□□□ 0.32
CACNA1A-250ENST00000637809 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
CACNA1A-250ENST00000637809 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
CACNA1A-250ENST00000637809 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
CACNA1A-250ENST00000637809 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-250ENST00000637809 POLD1P28340 1107 aa17■□□□□ 0.31
CACNA1A-250ENST00000637809 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
CACNA1A-250ENST00000637809 INSRP06213 1382 aa17■□□□□ 0.31
CACNA1A-250ENST00000637809 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
CACNA1A-250ENST00000637809 RAPGEF4Q8WZA2 1011 aa16.99■□□□□ 0.31
CACNA1A-250ENST00000637809 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
CACNA1A-250ENST00000637809 SMG6Q86US8 1419 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-250ENST00000637809 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
CACNA1A-250ENST00000637809 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 LY75O60449 1722 aa16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 GPR162Q16538 588 aa16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 NLGN2Q8NFZ4 835 aa16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 FLT4P35916 1363 aa16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 KIF24Q5T7B8 1368 aa16.97■□□□□ 0.31
CACNA1A-250ENST00000637809 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
CACNA1A-250ENST00000637809 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.3
CACNA1A-250ENST00000637809 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.3
CACNA1A-250ENST00000637809 CYP27B1O15528 508 aa16.95■□□□□ 0.3
CACNA1A-250ENST00000637809 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
CACNA1A-250ENST00000637809 TUBGCP6Q96RT7 1819 aa16.94■□□□□ 0.3
CACNA1A-250ENST00000637809 KAT6BQ8WYB5 2073 aa16.94■□□□□ 0.3
CACNA1A-250ENST00000637809 EMILIN1Q9Y6C2 1016 aa16.93■□□□□ 0.3
CACNA1A-250ENST00000637809 NCAPD2Q15021 1401 aa16.93■□□□□ 0.3
CACNA1A-250ENST00000637809 PALLDQ8WX93 1383 aa16.92■□□□□ 0.3
CACNA1A-250ENST00000637809 NSD3Q9BZ95 1437 aa16.92■□□□□ 0.3
CACNA1A-250ENST00000637809 MSH5O43196 834 aa16.91■□□□□ 0.3
CACNA1A-250ENST00000637809 YBX3P16989 372 aaKnown RBP eCLIP16.91■□□□□ 0.3
CACNA1A-250ENST00000637809 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
CACNA1A-250ENST00000637809 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
CACNA1A-250ENST00000637809 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
CACNA1A-250ENST00000637809 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-250ENST00000637809 NKX1-1Q15270 411 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-250ENST00000637809 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
CACNA1A-250ENST00000637809 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-250ENST00000637809 CEP350Q5VT06 3117 aa16.89■□□□□ 0.29
CACNA1A-250ENST00000637809 PIGBQ92521 554 aa16.88■□□□□ 0.29
CACNA1A-250ENST00000637809 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
CACNA1A-250ENST00000637809 CHD4Q14839 1912 aa16.88■□□□□ 0.29
CACNA1A-250ENST00000637809 KIF20BQ96Q89 1820 aa16.87■□□□□ 0.29
CACNA1A-250ENST00000637809 FLAD1Q8NFF5 587 aa16.87■□□□□ 0.29
CACNA1A-250ENST00000637809 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-250ENST00000637809 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-250ENST00000637809 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-250ENST00000637809 EYA1Q99502 592 aa16.86■□□□□ 0.29
CACNA1A-250ENST00000637809 CD2APQ9Y5K6 639 aa16.86■□□□□ 0.29
CACNA1A-250ENST00000637809 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
CACNA1A-250ENST00000637809 C5P01031 1676 aa16.85■□□□□ 0.29
CACNA1A-250ENST00000637809 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
CACNA1A-250ENST00000637809 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
CACNA1A-250ENST00000637809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNA1A-250ENST00000637809 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
CACNA1A-250ENST00000637809 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
CACNA1A-250ENST00000637809 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
CACNA1A-250ENST00000637809 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
CACNA1A-250ENST00000637809 AK7Q96M32 723 aa16.84■□□□□ 0.29
CACNA1A-250ENST00000637809 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
CACNA1A-250ENST00000637809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-250ENST00000637809 LOC102724428A0A0B4J2F2 783 aa16.83■□□□□ 0.28
CACNA1A-250ENST00000637809 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-250ENST00000637809 SIK1P57059 783 aa16.83■□□□□ 0.28
CACNA1A-250ENST00000637809 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
CACNA1A-250ENST00000637809 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
CACNA1A-250ENST00000637809 ANKRD26Q9UPS8 1709 aa16.82■□□□□ 0.28
CACNA1A-250ENST00000637809 PHF14O94880 888 aa16.81■□□□□ 0.28
CACNA1A-250ENST00000637809 PHKG2P15735 406 aa16.81■□□□□ 0.28
CACNA1A-250ENST00000637809 ASAP1Q9ULH1 1129 aa16.81■□□□□ 0.28
CACNA1A-250ENST00000637809 SSFA2P28290 1259 aa16.8■□□□□ 0.28
CACNA1A-250ENST00000637809 ITPK1Q13572 414 aa16.8■□□□□ 0.28
CACNA1A-250ENST00000637809 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-250ENST00000637809 TMOD3Q9NYL9 352 aa16.8■□□□□ 0.28
CACNA1A-250ENST00000637809 TAF1LQ8IZX4 1826 aa16.8■□□□□ 0.28
CACNA1A-250ENST00000637809 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
CACNA1A-250ENST00000637809 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
CACNA1A-250ENST00000637809 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-250ENST00000637809 ITGB4P16144 1822 aa16.77■□□□□ 0.28
CACNA1A-250ENST00000637809 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-250ENST00000637809 ATP10DQ9P241 1426 aa16.77■□□□□ 0.27
CACNA1A-250ENST00000637809 ADCY9O60503 1353 aa16.77■□□□□ 0.27
CACNA1A-250ENST00000637809 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.27
CACNA1A-250ENST00000637809 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
CACNA1A-250ENST00000637809 KDRP35968 1356 aa16.76■□□□□ 0.27
CACNA1A-250ENST00000637809 CLSPNQ9HAW4 1339 aa16.75■□□□□ 0.27
CACNA1A-250ENST00000637809 GNPATO15228 680 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms